Gene : Medtr1g106765 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF12767 - Transcriptional regulator of RNA polII, SAGA, subunit (SAGA-Tad1) Description:  transcriptional regulator of RNA polII, SAGA, subunit
Genomic Order:  6067 Name:  ? Medtr1g106765
Secondary Identifier:  ? PAC:31098912
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g106765 0.5kb upstream 0.5kb upstream 2533 true chr1: 48302872-48305404 Medicago truncatula
Medtr1g106765 0.5kb upstream 0.5kb upstream 500 false chr1: 48302872-48303371 Medicago truncatula
Medtr1g106765 0.5kb downstream 0.5kb downstream 2533 true chr1: 48303372-48305904 Medicago truncatula
Medtr1g106765 0.5kb downstream 0.5kb downstream 500 false chr1: 48305405-48305904 Medicago truncatula
Medtr1g106765 1.0kb upstream 1.0kb upstream 3033 true chr1: 48302372-48305404 Medicago truncatula
Medtr1g106765 1.0kb upstream 1.0kb upstream 1000 false chr1: 48302372-48303371 Medicago truncatula
Medtr1g106765 1.0kb downstream 1.0kb downstream 3033 true chr1: 48303372-48306404 Medicago truncatula
Medtr1g106765 1.0kb downstream 1.0kb downstream 1000 false chr1: 48305405-48306404 Medicago truncatula
Medtr1g106765 2.0kb upstream 2.0kb upstream 4033 true chr1: 48301372-48305404 Medicago truncatula
Medtr1g106765 2.0kb upstream 2.0kb upstream 2000 false chr1: 48301372-48303371 Medicago truncatula
Medtr1g106765 2.0kb downstream 2.0kb downstream 4033 true chr1: 48303372-48307404 Medicago truncatula
Medtr1g106765 2.0kb downstream 2.0kb downstream 2000 false chr1: 48305405-48307404 Medicago truncatula
Medtr1g106765 5.0kb upstream 5.0kb upstream 7033 true chr1: 48298372-48305404 Medicago truncatula
Medtr1g106765 5.0kb upstream 5.0kb upstream 5000 false chr1: 48298372-48303371 Medicago truncatula
Medtr1g106765 5.0kb downstream 5.0kb downstream 7033 true chr1: 48303372-48310404 Medicago truncatula
Medtr1g106765 5.0kb downstream 5.0kb downstream 5000 false chr1: 48305405-48310404 Medicago truncatula
Medtr1g106765 10.0kb upstream 10.0kb upstream 12033 true chr1: 48293372-48305404 Medicago truncatula
Medtr1g106765 10.0kb upstream 10.0kb upstream 10000 false chr1: 48293372-48303371 Medicago truncatula
Medtr1g106765 10.0kb downstream 10.0kb downstream 12033 true chr1: 48303372-48315404 Medicago truncatula
Medtr1g106765 10.0kb downstream 10.0kb downstream 10000 false chr1: 48305405-48315404 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303879 5265 Fabidae View MSA
124060712 5270 Rosid View MSA
123743282 5271 Pentapetalae View MSA
122790089 5272 Eudicot View MSA
122050052 5273 Angiosperm View MSA
121311708 5274 Embryophyte View MSA
123348971 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.737     High High
cufflinks 5.968        
cufflinks 9.12        
cufflinks 2.478       Low
cufflinks 8.558        
cufflinks 3.392       Low
cufflinks 7.899        
cufflinks 6.809        
cufflinks 6.783        

0 Strain