Gene : Medtr1g106200 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR31490:SF18 - 1,4-BETA-XYLAN ENDOHYDROLASE-RELATED Description:  glycosyl hydrolase family 10 protein
Genomic Order:  6039 Name:  ? Medtr1g106200
Secondary Identifier:  ? PAC:31095589
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g106200 0.5kb upstream 0.5kb upstream 3350 true chr1: 48105282-48108631 Medicago truncatula
Medtr1g106200 0.5kb upstream 0.5kb upstream 500 false chr1: 48108132-48108631 Medicago truncatula
Medtr1g106200 0.5kb downstream 0.5kb downstream 3350 true chr1: 48104782-48108131 Medicago truncatula
Medtr1g106200 0.5kb downstream 0.5kb downstream 500 false chr1: 48104782-48105281 Medicago truncatula
Medtr1g106200 1.0kb upstream 1.0kb upstream 3850 true chr1: 48105282-48109131 Medicago truncatula
Medtr1g106200 1.0kb upstream 1.0kb upstream 1000 false chr1: 48108132-48109131 Medicago truncatula
Medtr1g106200 1.0kb downstream 1.0kb downstream 3850 true chr1: 48104282-48108131 Medicago truncatula
Medtr1g106200 1.0kb downstream 1.0kb downstream 1000 false chr1: 48104282-48105281 Medicago truncatula
Medtr1g106200 2.0kb upstream 2.0kb upstream 4850 true chr1: 48105282-48110131 Medicago truncatula
Medtr1g106200 2.0kb upstream 2.0kb upstream 2000 false chr1: 48108132-48110131 Medicago truncatula
Medtr1g106200 2.0kb downstream 2.0kb downstream 4850 true chr1: 48103282-48108131 Medicago truncatula
Medtr1g106200 2.0kb downstream 2.0kb downstream 2000 false chr1: 48103282-48105281 Medicago truncatula
Medtr1g106200 5.0kb upstream 5.0kb upstream 7850 true chr1: 48105282-48113131 Medicago truncatula
Medtr1g106200 5.0kb upstream 5.0kb upstream 5000 false chr1: 48108132-48113131 Medicago truncatula
Medtr1g106200 5.0kb downstream 5.0kb downstream 7850 true chr1: 48100282-48108131 Medicago truncatula
Medtr1g106200 5.0kb downstream 5.0kb downstream 5000 false chr1: 48100282-48105281 Medicago truncatula
Medtr1g106200 10.0kb upstream 10.0kb upstream 12850 true chr1: 48105282-48118131 Medicago truncatula
Medtr1g106200 10.0kb upstream 10.0kb upstream 10000 false chr1: 48108132-48118131 Medicago truncatula
Medtr1g106200 10.0kb downstream 10.0kb downstream 12850 true chr1: 48095282-48108131 Medicago truncatula
Medtr1g106200 10.0kb downstream 10.0kb downstream 10000 false chr1: 48095282-48105281 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311948 5265 Fabidae View MSA
124074050 5270 Rosid View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.161        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.329        

0 Strain