Gene : Medtr1g106075 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF05479 - Photosystem I reaction centre subunit N (PSAN or PSI-N) (PsaN) Description:  photosystem I reaction center subunit N
Genomic Order:  6026 Name:  ? Medtr1g106075
Secondary Identifier:  ? PAC:31097226
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g106075 0.5kb upstream 0.5kb upstream 1429 true chr1: 48006241-48007669 Medicago truncatula
Medtr1g106075 0.5kb upstream 0.5kb upstream 500 false chr1: 48006241-48006740 Medicago truncatula
Medtr1g106075 0.5kb downstream 0.5kb downstream 1429 true chr1: 48006741-48008169 Medicago truncatula
Medtr1g106075 0.5kb downstream 0.5kb downstream 500 false chr1: 48007670-48008169 Medicago truncatula
Medtr1g106075 1.0kb upstream 1.0kb upstream 1929 true chr1: 48005741-48007669 Medicago truncatula
Medtr1g106075 1.0kb upstream 1.0kb upstream 1000 false chr1: 48005741-48006740 Medicago truncatula
Medtr1g106075 1.0kb downstream 1.0kb downstream 1929 true chr1: 48006741-48008669 Medicago truncatula
Medtr1g106075 1.0kb downstream 1.0kb downstream 1000 false chr1: 48007670-48008669 Medicago truncatula
Medtr1g106075 2.0kb upstream 2.0kb upstream 2929 true chr1: 48004741-48007669 Medicago truncatula
Medtr1g106075 2.0kb upstream 2.0kb upstream 2000 false chr1: 48004741-48006740 Medicago truncatula
Medtr1g106075 2.0kb downstream 2.0kb downstream 2929 true chr1: 48006741-48009669 Medicago truncatula
Medtr1g106075 2.0kb downstream 2.0kb downstream 2000 false chr1: 48007670-48009669 Medicago truncatula
Medtr1g106075 5.0kb upstream 5.0kb upstream 5929 true chr1: 48001741-48007669 Medicago truncatula
Medtr1g106075 5.0kb upstream 5.0kb upstream 5000 false chr1: 48001741-48006740 Medicago truncatula
Medtr1g106075 5.0kb downstream 5.0kb downstream 5929 true chr1: 48006741-48012669 Medicago truncatula
Medtr1g106075 5.0kb downstream 5.0kb downstream 5000 false chr1: 48007670-48012669 Medicago truncatula
Medtr1g106075 10.0kb upstream 10.0kb upstream 10929 true chr1: 47996741-48007669 Medicago truncatula
Medtr1g106075 10.0kb upstream 10.0kb upstream 10000 false chr1: 47996741-48006740 Medicago truncatula
Medtr1g106075 10.0kb downstream 10.0kb downstream 10929 true chr1: 48006741-48017669 Medicago truncatula
Medtr1g106075 10.0kb downstream 10.0kb downstream 10000 false chr1: 48007670-48017669 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304642 5265 Fabidae View MSA
124067734 5270 Rosid View MSA
123736810 5271 Pentapetalae View MSA
122791162 5272 Eudicot View MSA
122050730 5273 Angiosperm View MSA
121348092 5274 Embryophyte View MSA
123425572 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 12.159     High  
cufflinks 9.657        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 26.319     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.217     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain