Gene : Medtr1g107085 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  6087
Name:  ? Medtr1g107085 Secondary Identifier:  ? PAC:31095557
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g107085 0.5kb upstream 0.5kb upstream 2801 true chr1: 48464807-48467607 Medicago truncatula
Medtr1g107085 0.5kb upstream 0.5kb upstream 500 false chr1: 48467108-48467607 Medicago truncatula
Medtr1g107085 0.5kb downstream 0.5kb downstream 2801 true chr1: 48464307-48467107 Medicago truncatula
Medtr1g107085 0.5kb downstream 0.5kb downstream 500 false chr1: 48464307-48464806 Medicago truncatula
Medtr1g107085 1.0kb upstream 1.0kb upstream 3301 true chr1: 48464807-48468107 Medicago truncatula
Medtr1g107085 1.0kb upstream 1.0kb upstream 1000 false chr1: 48467108-48468107 Medicago truncatula
Medtr1g107085 1.0kb downstream 1.0kb downstream 3301 true chr1: 48463807-48467107 Medicago truncatula
Medtr1g107085 1.0kb downstream 1.0kb downstream 1000 false chr1: 48463807-48464806 Medicago truncatula
Medtr1g107085 2.0kb upstream 2.0kb upstream 4301 true chr1: 48464807-48469107 Medicago truncatula
Medtr1g107085 2.0kb upstream 2.0kb upstream 2000 false chr1: 48467108-48469107 Medicago truncatula
Medtr1g107085 2.0kb downstream 2.0kb downstream 4301 true chr1: 48462807-48467107 Medicago truncatula
Medtr1g107085 2.0kb downstream 2.0kb downstream 2000 false chr1: 48462807-48464806 Medicago truncatula
Medtr1g107085 5.0kb upstream 5.0kb upstream 7301 true chr1: 48464807-48472107 Medicago truncatula
Medtr1g107085 5.0kb upstream 5.0kb upstream 5000 false chr1: 48467108-48472107 Medicago truncatula
Medtr1g107085 5.0kb downstream 5.0kb downstream 7301 true chr1: 48459807-48467107 Medicago truncatula
Medtr1g107085 5.0kb downstream 5.0kb downstream 5000 false chr1: 48459807-48464806 Medicago truncatula
Medtr1g107085 10.0kb upstream 10.0kb upstream 12301 true chr1: 48464807-48477107 Medicago truncatula
Medtr1g107085 10.0kb upstream 10.0kb upstream 10000 false chr1: 48467108-48477107 Medicago truncatula
Medtr1g107085 10.0kb downstream 10.0kb downstream 12301 true chr1: 48454807-48467107 Medicago truncatula
Medtr1g107085 10.0kb downstream 10.0kb downstream 10000 false chr1: 48454807-48464806 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312320 5265 Fabidae View MSA
124073761 5270 Rosid View MSA
123742798 5271 Pentapetalae View MSA
122793453 5272 Eudicot View MSA
122048539 5273 Angiosperm View MSA
121350224 5274 Embryophyte View MSA
123381631 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.728       Low
cufflinks 1.055        
cufflinks 1.229        
cufflinks 5.761       High
cufflinks 2.099        
cufflinks 8.871       High
cufflinks 1.237        
cufflinks 1.398        
cufflinks 3.157        

0 Strain