Gene : Medtr1g107215 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF04450 - Peptidase of plants and bacteria (BSP) Description:  plant basic secretory protein (BSP) family protein
Genomic Order:  6096 Name:  ? Medtr1g107215
Secondary Identifier:  ? PAC:31099611
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g107215 0.5kb upstream 0.5kb upstream 1601 true chr1: 48522358-48523958 Medicago truncatula
Medtr1g107215 0.5kb upstream 0.5kb upstream 500 false chr1: 48522358-48522857 Medicago truncatula
Medtr1g107215 0.5kb downstream 0.5kb downstream 1601 true chr1: 48522858-48524458 Medicago truncatula
Medtr1g107215 0.5kb downstream 0.5kb downstream 500 false chr1: 48523959-48524458 Medicago truncatula
Medtr1g107215 1.0kb upstream 1.0kb upstream 2101 true chr1: 48521858-48523958 Medicago truncatula
Medtr1g107215 1.0kb upstream 1.0kb upstream 1000 false chr1: 48521858-48522857 Medicago truncatula
Medtr1g107215 1.0kb downstream 1.0kb downstream 2101 true chr1: 48522858-48524958 Medicago truncatula
Medtr1g107215 1.0kb downstream 1.0kb downstream 1000 false chr1: 48523959-48524958 Medicago truncatula
Medtr1g107215 2.0kb upstream 2.0kb upstream 3101 true chr1: 48520858-48523958 Medicago truncatula
Medtr1g107215 2.0kb upstream 2.0kb upstream 2000 false chr1: 48520858-48522857 Medicago truncatula
Medtr1g107215 2.0kb downstream 2.0kb downstream 3101 true chr1: 48522858-48525958 Medicago truncatula
Medtr1g107215 2.0kb downstream 2.0kb downstream 2000 false chr1: 48523959-48525958 Medicago truncatula
Medtr1g107215 5.0kb upstream 5.0kb upstream 6101 true chr1: 48517858-48523958 Medicago truncatula
Medtr1g107215 5.0kb upstream 5.0kb upstream 5000 false chr1: 48517858-48522857 Medicago truncatula
Medtr1g107215 5.0kb downstream 5.0kb downstream 6101 true chr1: 48522858-48528958 Medicago truncatula
Medtr1g107215 5.0kb downstream 5.0kb downstream 5000 false chr1: 48523959-48528958 Medicago truncatula
Medtr1g107215 10.0kb upstream 10.0kb upstream 11101 true chr1: 48512858-48523958 Medicago truncatula
Medtr1g107215 10.0kb upstream 10.0kb upstream 10000 false chr1: 48512858-48522857 Medicago truncatula
Medtr1g107215 10.0kb downstream 10.0kb downstream 11101 true chr1: 48522858-48533958 Medicago truncatula
Medtr1g107215 10.0kb downstream 10.0kb downstream 10000 false chr1: 48523959-48533958 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314822 5265 Fabidae View MSA
124062491 5270 Rosid View MSA
123748225 5271 Pentapetalae View MSA
122793503 5272 Eudicot View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.599        
cufflinks 28.132     High  
cufflinks 11.314     High  
cufflinks 6.816       Low
cufflinks 14.095     High  
cufflinks 27.829     High  
cufflinks 133.412     High High
cufflinks 15.805     High  
cufflinks 21.992     High  

0 Strain