Gene : Medtr1g107055 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR10042 - EARLY GROWTH RESPONSE PROTEIN-RELATED Description:  zinc finger-like protein
Genomic Order:  6085 Name:  ? Medtr1g107055
Secondary Identifier:  ? PAC:31096021
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g107055 0.5kb upstream 0.5kb upstream 2501 true chr1: 48459368-48461868 Medicago truncatula
Medtr1g107055 0.5kb upstream 0.5kb upstream 500 false chr1: 48461369-48461868 Medicago truncatula
Medtr1g107055 0.5kb downstream 0.5kb downstream 2501 true chr1: 48458868-48461368 Medicago truncatula
Medtr1g107055 0.5kb downstream 0.5kb downstream 500 false chr1: 48458868-48459367 Medicago truncatula
Medtr1g107055 1.0kb upstream 1.0kb upstream 3001 true chr1: 48459368-48462368 Medicago truncatula
Medtr1g107055 1.0kb upstream 1.0kb upstream 1000 false chr1: 48461369-48462368 Medicago truncatula
Medtr1g107055 1.0kb downstream 1.0kb downstream 3001 true chr1: 48458368-48461368 Medicago truncatula
Medtr1g107055 1.0kb downstream 1.0kb downstream 1000 false chr1: 48458368-48459367 Medicago truncatula
Medtr1g107055 2.0kb upstream 2.0kb upstream 4001 true chr1: 48459368-48463368 Medicago truncatula
Medtr1g107055 2.0kb upstream 2.0kb upstream 2000 false chr1: 48461369-48463368 Medicago truncatula
Medtr1g107055 2.0kb downstream 2.0kb downstream 4001 true chr1: 48457368-48461368 Medicago truncatula
Medtr1g107055 2.0kb downstream 2.0kb downstream 2000 false chr1: 48457368-48459367 Medicago truncatula
Medtr1g107055 5.0kb upstream 5.0kb upstream 7001 true chr1: 48459368-48466368 Medicago truncatula
Medtr1g107055 5.0kb upstream 5.0kb upstream 5000 false chr1: 48461369-48466368 Medicago truncatula
Medtr1g107055 5.0kb downstream 5.0kb downstream 7001 true chr1: 48454368-48461368 Medicago truncatula
Medtr1g107055 5.0kb downstream 5.0kb downstream 5000 false chr1: 48454368-48459367 Medicago truncatula
Medtr1g107055 10.0kb upstream 10.0kb upstream 12001 true chr1: 48459368-48471368 Medicago truncatula
Medtr1g107055 10.0kb upstream 10.0kb upstream 10000 false chr1: 48461369-48471368 Medicago truncatula
Medtr1g107055 10.0kb downstream 10.0kb downstream 12001 true chr1: 48449368-48461368 Medicago truncatula
Medtr1g107055 10.0kb downstream 10.0kb downstream 10000 false chr1: 48449368-48459367 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301437 5265 Fabidae View MSA
124072732 5270 Rosid View MSA
123749551 5271 Pentapetalae View MSA
122797803 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.145       Low
cufflinks 1.227        
cufflinks 1.131        
cufflinks 0.155       Low
cufflinks 1.264       High
cufflinks 0.556        
cufflinks 0.283        
cufflinks 1.126        
cufflinks 0.136       Low

0 Strain