Gene : Medtr1g106940 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR22765:SF54 - VACUOLAR-SORTING RECEPTOR 3-RELATED Description:  vacuolar-sorting receptor-like protein
Genomic Order:  6043 Name:  ? Medtr1g106940
Secondary Identifier:  ? PAC:31095860
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g106940 0.5kb upstream 0.5kb upstream 7143 true chr1: 48131465-48138607 Medicago truncatula
Medtr1g106940 0.5kb upstream 0.5kb upstream 500 false chr1: 48131465-48131964 Medicago truncatula
Medtr1g106940 0.5kb downstream 0.5kb downstream 7143 true chr1: 48131965-48139107 Medicago truncatula
Medtr1g106940 0.5kb downstream 0.5kb downstream 500 false chr1: 48138608-48139107 Medicago truncatula
Medtr1g106940 1.0kb upstream 1.0kb upstream 7643 true chr1: 48130965-48138607 Medicago truncatula
Medtr1g106940 1.0kb upstream 1.0kb upstream 1000 false chr1: 48130965-48131964 Medicago truncatula
Medtr1g106940 1.0kb downstream 1.0kb downstream 7643 true chr1: 48131965-48139607 Medicago truncatula
Medtr1g106940 1.0kb downstream 1.0kb downstream 1000 false chr1: 48138608-48139607 Medicago truncatula
Medtr1g106940 2.0kb upstream 2.0kb upstream 8643 true chr1: 48129965-48138607 Medicago truncatula
Medtr1g106940 2.0kb upstream 2.0kb upstream 2000 false chr1: 48129965-48131964 Medicago truncatula
Medtr1g106940 2.0kb downstream 2.0kb downstream 8643 true chr1: 48131965-48140607 Medicago truncatula
Medtr1g106940 2.0kb downstream 2.0kb downstream 2000 false chr1: 48138608-48140607 Medicago truncatula
Medtr1g106940 5.0kb upstream 5.0kb upstream 11643 true chr1: 48126965-48138607 Medicago truncatula
Medtr1g106940 5.0kb upstream 5.0kb upstream 5000 false chr1: 48126965-48131964 Medicago truncatula
Medtr1g106940 5.0kb downstream 5.0kb downstream 11643 true chr1: 48131965-48143607 Medicago truncatula
Medtr1g106940 5.0kb downstream 5.0kb downstream 5000 false chr1: 48138608-48143607 Medicago truncatula
Medtr1g106940 10.0kb upstream 10.0kb upstream 16643 true chr1: 48121965-48138607 Medicago truncatula
Medtr1g106940 10.0kb upstream 10.0kb upstream 10000 false chr1: 48121965-48131964 Medicago truncatula
Medtr1g106940 10.0kb downstream 10.0kb downstream 16643 true chr1: 48131965-48148607 Medicago truncatula
Medtr1g106940 10.0kb downstream 10.0kb downstream 10000 false chr1: 48138608-48148607 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300582 5265 Fabidae View MSA
124068352 5270 Rosid View MSA
123747014 5271 Pentapetalae View MSA
122793065 5272 Eudicot View MSA
122047431 5273 Angiosperm View MSA
121350422 5274 Embryophyte View MSA
123428728 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.936        
cufflinks 8.302        
cufflinks 7.306        
cufflinks 4.053       Low
cufflinks 8.083        
cufflinks 3.843       Low
cufflinks 7.298        
cufflinks 6.653        
cufflinks 6.856        

0 Strain