Gene : Medtr1g107555 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11709//PTHR11709:SF89 - MULTI-COPPER OXIDASE Description:  spore coat A-like protein
Genomic Order:  6149 Name:  ? Medtr1g107555
Secondary Identifier:  ? PAC:31096576
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g107555 0.5kb upstream 0.5kb upstream 4122 true chr1: 48881578-48885699 Medicago truncatula
Medtr1g107555 0.5kb upstream 0.5kb upstream 500 false chr1: 48885200-48885699 Medicago truncatula
Medtr1g107555 0.5kb downstream 0.5kb downstream 4122 true chr1: 48881078-48885199 Medicago truncatula
Medtr1g107555 0.5kb downstream 0.5kb downstream 500 false chr1: 48881078-48881577 Medicago truncatula
Medtr1g107555 1.0kb upstream 1.0kb upstream 4622 true chr1: 48881578-48886199 Medicago truncatula
Medtr1g107555 1.0kb upstream 1.0kb upstream 1000 false chr1: 48885200-48886199 Medicago truncatula
Medtr1g107555 1.0kb downstream 1.0kb downstream 4622 true chr1: 48880578-48885199 Medicago truncatula
Medtr1g107555 1.0kb downstream 1.0kb downstream 1000 false chr1: 48880578-48881577 Medicago truncatula
Medtr1g107555 2.0kb upstream 2.0kb upstream 5622 true chr1: 48881578-48887199 Medicago truncatula
Medtr1g107555 2.0kb upstream 2.0kb upstream 2000 false chr1: 48885200-48887199 Medicago truncatula
Medtr1g107555 2.0kb downstream 2.0kb downstream 5622 true chr1: 48879578-48885199 Medicago truncatula
Medtr1g107555 2.0kb downstream 2.0kb downstream 2000 false chr1: 48879578-48881577 Medicago truncatula
Medtr1g107555 5.0kb upstream 5.0kb upstream 8622 true chr1: 48881578-48890199 Medicago truncatula
Medtr1g107555 5.0kb upstream 5.0kb upstream 5000 false chr1: 48885200-48890199 Medicago truncatula
Medtr1g107555 5.0kb downstream 5.0kb downstream 8622 true chr1: 48876578-48885199 Medicago truncatula
Medtr1g107555 5.0kb downstream 5.0kb downstream 5000 false chr1: 48876578-48881577 Medicago truncatula
Medtr1g107555 10.0kb upstream 10.0kb upstream 13622 true chr1: 48881578-48895199 Medicago truncatula
Medtr1g107555 10.0kb upstream 10.0kb upstream 10000 false chr1: 48885200-48895199 Medicago truncatula
Medtr1g107555 10.0kb downstream 10.0kb downstream 13622 true chr1: 48871578-48885199 Medicago truncatula
Medtr1g107555 10.0kb downstream 10.0kb downstream 10000 false chr1: 48871578-48881577 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306228 5265 Fabidae View MSA
124061709 5270 Rosid View MSA
123740196 5271 Pentapetalae View MSA
122792722 5272 Eudicot View MSA
122045679 5273 Angiosperm View MSA
121347815 5274 Embryophyte View MSA
123380640 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.3       Low
cufflinks 18.109     High  
cufflinks 16.717     High  
cufflinks 1.891        
cufflinks 21.899     High High
cufflinks 0.861       Low
cufflinks 3.752        
cufflinks 13.491     High  
cufflinks 3.677        

0 Strain