Gene : Medtr1g107560 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR19856 - WD-REPEATCONTAINING PROTEIN WDR1 Description:  transducin/WD40 repeat protein
Genomic Order:  6150 Name:  ? Medtr1g107560
Secondary Identifier:  ? PAC:31099247
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g107560 0.5kb upstream 0.5kb upstream 4922 true chr1: 48885513-48890434 Medicago truncatula
Medtr1g107560 0.5kb upstream 0.5kb upstream 500 false chr1: 48885513-48886012 Medicago truncatula
Medtr1g107560 0.5kb downstream 0.5kb downstream 4922 true chr1: 48886013-48890934 Medicago truncatula
Medtr1g107560 0.5kb downstream 0.5kb downstream 500 false chr1: 48890435-48890934 Medicago truncatula
Medtr1g107560 1.0kb upstream 1.0kb upstream 5422 true chr1: 48885013-48890434 Medicago truncatula
Medtr1g107560 1.0kb upstream 1.0kb upstream 1000 false chr1: 48885013-48886012 Medicago truncatula
Medtr1g107560 1.0kb downstream 1.0kb downstream 5422 true chr1: 48886013-48891434 Medicago truncatula
Medtr1g107560 1.0kb downstream 1.0kb downstream 1000 false chr1: 48890435-48891434 Medicago truncatula
Medtr1g107560 2.0kb upstream 2.0kb upstream 6422 true chr1: 48884013-48890434 Medicago truncatula
Medtr1g107560 2.0kb upstream 2.0kb upstream 2000 false chr1: 48884013-48886012 Medicago truncatula
Medtr1g107560 2.0kb downstream 2.0kb downstream 6422 true chr1: 48886013-48892434 Medicago truncatula
Medtr1g107560 2.0kb downstream 2.0kb downstream 2000 false chr1: 48890435-48892434 Medicago truncatula
Medtr1g107560 5.0kb upstream 5.0kb upstream 9422 true chr1: 48881013-48890434 Medicago truncatula
Medtr1g107560 5.0kb upstream 5.0kb upstream 5000 false chr1: 48881013-48886012 Medicago truncatula
Medtr1g107560 5.0kb downstream 5.0kb downstream 9422 true chr1: 48886013-48895434 Medicago truncatula
Medtr1g107560 5.0kb downstream 5.0kb downstream 5000 false chr1: 48890435-48895434 Medicago truncatula
Medtr1g107560 10.0kb upstream 10.0kb upstream 14422 true chr1: 48876013-48890434 Medicago truncatula
Medtr1g107560 10.0kb upstream 10.0kb upstream 10000 false chr1: 48876013-48886012 Medicago truncatula
Medtr1g107560 10.0kb downstream 10.0kb downstream 14422 true chr1: 48886013-48900434 Medicago truncatula
Medtr1g107560 10.0kb downstream 10.0kb downstream 10000 false chr1: 48890435-48900434 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296513 5265 Fabidae View MSA
124037308 5270 Rosid View MSA
123741573 5271 Pentapetalae View MSA
122790877 5272 Eudicot View MSA
122044003 5273 Angiosperm View MSA
121344306 5274 Embryophyte View MSA
123425360 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.012     Low  
cufflinks 0.005     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.038     Low High

0 Strain