Gene : Medtr1g109080 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR30371 - SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC Description:  Sec-independent protein translocase TatC
Genomic Order:  6207 Name:  ? Medtr1g109080
Secondary Identifier:  ? PAC:31098183
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g109080 0.5kb upstream 0.5kb upstream 3861 true chr1: 49280146-49284006 Medicago truncatula
Medtr1g109080 0.5kb upstream 0.5kb upstream 500 false chr1: 49283507-49284006 Medicago truncatula
Medtr1g109080 0.5kb downstream 0.5kb downstream 3861 true chr1: 49279646-49283506 Medicago truncatula
Medtr1g109080 0.5kb downstream 0.5kb downstream 500 false chr1: 49279646-49280145 Medicago truncatula
Medtr1g109080 1.0kb upstream 1.0kb upstream 4361 true chr1: 49280146-49284506 Medicago truncatula
Medtr1g109080 1.0kb upstream 1.0kb upstream 1000 false chr1: 49283507-49284506 Medicago truncatula
Medtr1g109080 1.0kb downstream 1.0kb downstream 4361 true chr1: 49279146-49283506 Medicago truncatula
Medtr1g109080 1.0kb downstream 1.0kb downstream 1000 false chr1: 49279146-49280145 Medicago truncatula
Medtr1g109080 2.0kb upstream 2.0kb upstream 5361 true chr1: 49280146-49285506 Medicago truncatula
Medtr1g109080 2.0kb upstream 2.0kb upstream 2000 false chr1: 49283507-49285506 Medicago truncatula
Medtr1g109080 2.0kb downstream 2.0kb downstream 5361 true chr1: 49278146-49283506 Medicago truncatula
Medtr1g109080 2.0kb downstream 2.0kb downstream 2000 false chr1: 49278146-49280145 Medicago truncatula
Medtr1g109080 5.0kb upstream 5.0kb upstream 8361 true chr1: 49280146-49288506 Medicago truncatula
Medtr1g109080 5.0kb upstream 5.0kb upstream 5000 false chr1: 49283507-49288506 Medicago truncatula
Medtr1g109080 5.0kb downstream 5.0kb downstream 8361 true chr1: 49275146-49283506 Medicago truncatula
Medtr1g109080 5.0kb downstream 5.0kb downstream 5000 false chr1: 49275146-49280145 Medicago truncatula
Medtr1g109080 10.0kb upstream 10.0kb upstream 13361 true chr1: 49280146-49293506 Medicago truncatula
Medtr1g109080 10.0kb upstream 10.0kb upstream 10000 false chr1: 49283507-49293506 Medicago truncatula
Medtr1g109080 10.0kb downstream 10.0kb downstream 13361 true chr1: 49270146-49283506 Medicago truncatula
Medtr1g109080 10.0kb downstream 10.0kb downstream 10000 false chr1: 49270146-49280145 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040890 5273 Angiosperm View MSA
122303582 5265 Fabidae View MSA
124063955 5270 Rosid View MSA
123743752 5271 Pentapetalae View MSA
122793561 5272 Eudicot View MSA
121345503 5274 Embryophyte View MSA
123424505 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.947       Low
cufflinks 21.446     High  
cufflinks 25.874     High High
cufflinks 10.109     High  
cufflinks 30.382     High High
cufflinks 5.311       Low
cufflinks 7.272        
cufflinks 21.996     High  
cufflinks 5.718        

0 Strain