Gene : Medtr1g110410 M. truncatula Mt4.0v1
Defline:  (1 of 13) PF07816 - Protein of unknown function (DUF1645) Description:  hypothetical protein
Genomic Order:  6277 Name:  ? Medtr1g110410
Secondary Identifier:  ? PAC:31093689
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g110410 0.5kb upstream 0.5kb upstream 1595 true chr1: 49816565-49818159 Medicago truncatula
Medtr1g110410 0.5kb upstream 0.5kb upstream 500 false chr1: 49817660-49818159 Medicago truncatula
Medtr1g110410 0.5kb downstream 0.5kb downstream 1595 true chr1: 49816065-49817659 Medicago truncatula
Medtr1g110410 0.5kb downstream 0.5kb downstream 500 false chr1: 49816065-49816564 Medicago truncatula
Medtr1g110410 1.0kb upstream 1.0kb upstream 2095 true chr1: 49816565-49818659 Medicago truncatula
Medtr1g110410 1.0kb upstream 1.0kb upstream 1000 false chr1: 49817660-49818659 Medicago truncatula
Medtr1g110410 1.0kb downstream 1.0kb downstream 2095 true chr1: 49815565-49817659 Medicago truncatula
Medtr1g110410 1.0kb downstream 1.0kb downstream 1000 false chr1: 49815565-49816564 Medicago truncatula
Medtr1g110410 2.0kb upstream 2.0kb upstream 3095 true chr1: 49816565-49819659 Medicago truncatula
Medtr1g110410 2.0kb upstream 2.0kb upstream 2000 false chr1: 49817660-49819659 Medicago truncatula
Medtr1g110410 2.0kb downstream 2.0kb downstream 3095 true chr1: 49814565-49817659 Medicago truncatula
Medtr1g110410 2.0kb downstream 2.0kb downstream 2000 false chr1: 49814565-49816564 Medicago truncatula
Medtr1g110410 5.0kb upstream 5.0kb upstream 6095 true chr1: 49816565-49822659 Medicago truncatula
Medtr1g110410 5.0kb upstream 5.0kb upstream 5000 false chr1: 49817660-49822659 Medicago truncatula
Medtr1g110410 5.0kb downstream 5.0kb downstream 6095 true chr1: 49811565-49817659 Medicago truncatula
Medtr1g110410 5.0kb downstream 5.0kb downstream 5000 false chr1: 49811565-49816564 Medicago truncatula
Medtr1g110410 10.0kb upstream 10.0kb upstream 11095 true chr1: 49816565-49827659 Medicago truncatula
Medtr1g110410 10.0kb upstream 10.0kb upstream 10000 false chr1: 49817660-49827659 Medicago truncatula
Medtr1g110410 10.0kb downstream 10.0kb downstream 11095 true chr1: 49806565-49817659 Medicago truncatula
Medtr1g110410 10.0kb downstream 10.0kb downstream 10000 false chr1: 49806565-49816564 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299103 5265 Fabidae View MSA
124065676 5270 Rosid View MSA
123746732 5271 Pentapetalae View MSA
122786820 5272 Eudicot View MSA
122047207 5273 Angiosperm View MSA
121310707 5274 Embryophyte View MSA
123348126 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033     Low Low
cufflinks 0.16        
cufflinks 0.193        
cufflinks 0.131        
cufflinks 0.248        
cufflinks 0.167        
cufflinks 0.17        
cufflinks 0.185        
cufflinks 0.176        

0 Strain