Gene : Medtr1g110430 M. truncatula Mt4.0v1
Defline:  (1 of 1) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase Description:  glutamine-tRNA ligase
Genomic Order:  6278 Name:  ? Medtr1g110430
Secondary Identifier:  ? PAC:31099926
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula TRNA-CHARGING-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g110430 0.5kb upstream 0.5kb upstream 12959 true chr1: 49823738-49836696 Medicago truncatula
Medtr1g110430 0.5kb upstream 0.5kb upstream 500 false chr1: 49823738-49824237 Medicago truncatula
Medtr1g110430 0.5kb downstream 0.5kb downstream 12959 true chr1: 49824238-49837196 Medicago truncatula
Medtr1g110430 0.5kb downstream 0.5kb downstream 500 false chr1: 49836697-49837196 Medicago truncatula
Medtr1g110430 1.0kb upstream 1.0kb upstream 13459 true chr1: 49823238-49836696 Medicago truncatula
Medtr1g110430 1.0kb upstream 1.0kb upstream 1000 false chr1: 49823238-49824237 Medicago truncatula
Medtr1g110430 1.0kb downstream 1.0kb downstream 13459 true chr1: 49824238-49837696 Medicago truncatula
Medtr1g110430 1.0kb downstream 1.0kb downstream 1000 false chr1: 49836697-49837696 Medicago truncatula
Medtr1g110430 2.0kb upstream 2.0kb upstream 14459 true chr1: 49822238-49836696 Medicago truncatula
Medtr1g110430 2.0kb upstream 2.0kb upstream 2000 false chr1: 49822238-49824237 Medicago truncatula
Medtr1g110430 2.0kb downstream 2.0kb downstream 14459 true chr1: 49824238-49838696 Medicago truncatula
Medtr1g110430 2.0kb downstream 2.0kb downstream 2000 false chr1: 49836697-49838696 Medicago truncatula
Medtr1g110430 5.0kb upstream 5.0kb upstream 17459 true chr1: 49819238-49836696 Medicago truncatula
Medtr1g110430 5.0kb upstream 5.0kb upstream 5000 false chr1: 49819238-49824237 Medicago truncatula
Medtr1g110430 5.0kb downstream 5.0kb downstream 17459 true chr1: 49824238-49841696 Medicago truncatula
Medtr1g110430 5.0kb downstream 5.0kb downstream 5000 false chr1: 49836697-49841696 Medicago truncatula
Medtr1g110430 10.0kb upstream 10.0kb upstream 22459 true chr1: 49814238-49836696 Medicago truncatula
Medtr1g110430 10.0kb upstream 10.0kb upstream 10000 false chr1: 49814238-49824237 Medicago truncatula
Medtr1g110430 10.0kb downstream 10.0kb downstream 22459 true chr1: 49824238-49846696 Medicago truncatula
Medtr1g110430 10.0kb downstream 10.0kb downstream 10000 false chr1: 49836697-49846696 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308481 5265 Fabidae View MSA
124062151 5270 Rosid View MSA
123744952 5271 Pentapetalae View MSA
122789610 5272 Eudicot View MSA
122046880 5273 Angiosperm View MSA
121346731 5274 Embryophyte View MSA
123424701 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.832        
cufflinks 1.977        
cufflinks 2.008        
cufflinks 0.882       Low
cufflinks 3.035       High
cufflinks 0.778       Low
cufflinks 2.044        
cufflinks 1.709        
cufflinks 2.486        

0 Strain