Gene : Medtr1g109660 M. truncatula Mt4.0v1
Defline:  (1 of 19) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Description:  fiber protein Fb34
Genomic Order:  6246 Name:  ? Medtr1g109660
Secondary Identifier:  ? PAC:31097753
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g109660 0.5kb upstream 0.5kb upstream 3218 true chr1: 49602362-49605579 Medicago truncatula
Medtr1g109660 0.5kb upstream 0.5kb upstream 500 false chr1: 49605080-49605579 Medicago truncatula
Medtr1g109660 0.5kb downstream 0.5kb downstream 3218 true chr1: 49601862-49605079 Medicago truncatula
Medtr1g109660 0.5kb downstream 0.5kb downstream 500 false chr1: 49601862-49602361 Medicago truncatula
Medtr1g109660 1.0kb upstream 1.0kb upstream 3718 true chr1: 49602362-49606079 Medicago truncatula
Medtr1g109660 1.0kb upstream 1.0kb upstream 1000 false chr1: 49605080-49606079 Medicago truncatula
Medtr1g109660 1.0kb downstream 1.0kb downstream 3718 true chr1: 49601362-49605079 Medicago truncatula
Medtr1g109660 1.0kb downstream 1.0kb downstream 1000 false chr1: 49601362-49602361 Medicago truncatula
Medtr1g109660 2.0kb upstream 2.0kb upstream 4718 true chr1: 49602362-49607079 Medicago truncatula
Medtr1g109660 2.0kb upstream 2.0kb upstream 2000 false chr1: 49605080-49607079 Medicago truncatula
Medtr1g109660 2.0kb downstream 2.0kb downstream 4718 true chr1: 49600362-49605079 Medicago truncatula
Medtr1g109660 2.0kb downstream 2.0kb downstream 2000 false chr1: 49600362-49602361 Medicago truncatula
Medtr1g109660 5.0kb upstream 5.0kb upstream 7718 true chr1: 49602362-49610079 Medicago truncatula
Medtr1g109660 5.0kb upstream 5.0kb upstream 5000 false chr1: 49605080-49610079 Medicago truncatula
Medtr1g109660 5.0kb downstream 5.0kb downstream 7718 true chr1: 49597362-49605079 Medicago truncatula
Medtr1g109660 5.0kb downstream 5.0kb downstream 5000 false chr1: 49597362-49602361 Medicago truncatula
Medtr1g109660 10.0kb upstream 10.0kb upstream 12718 true chr1: 49602362-49615079 Medicago truncatula
Medtr1g109660 10.0kb upstream 10.0kb upstream 10000 false chr1: 49605080-49615079 Medicago truncatula
Medtr1g109660 10.0kb downstream 10.0kb downstream 12718 true chr1: 49592362-49605079 Medicago truncatula
Medtr1g109660 10.0kb downstream 10.0kb downstream 10000 false chr1: 49592362-49602361 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308826 5265 Fabidae View MSA
124065482 5270 Rosid View MSA
123737979 5271 Pentapetalae View MSA
122790075 5272 Eudicot View MSA
122049951 5273 Angiosperm View MSA
121351740 5274 Embryophyte View MSA
123382300 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.876       Low
cufflinks 3.625        
cufflinks 4.19        
cufflinks 4.556        
cufflinks 7.879       High
cufflinks 1.674       Low
cufflinks 1.919       Low
cufflinks 3.528        
cufflinks 3.846        

0 Strain