Gene : Medtr1g111330 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12385:SF36 - PLASMA-MEMBRANE CHOLINE TRANSPORTER-LIKE PROTEIN Description:  plasma-membrane choline transporter family protein
Genomic Order:  6335 Name:  ? Medtr1g111330
Secondary Identifier:  ? PAC:31096152
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g111330 0.5kb upstream 0.5kb upstream 4795 true chr1: 50297718-50302512 Medicago truncatula
Medtr1g111330 0.5kb upstream 0.5kb upstream 500 false chr1: 50302013-50302512 Medicago truncatula
Medtr1g111330 0.5kb downstream 0.5kb downstream 4795 true chr1: 50297218-50302012 Medicago truncatula
Medtr1g111330 0.5kb downstream 0.5kb downstream 500 false chr1: 50297218-50297717 Medicago truncatula
Medtr1g111330 1.0kb upstream 1.0kb upstream 5295 true chr1: 50297718-50303012 Medicago truncatula
Medtr1g111330 1.0kb upstream 1.0kb upstream 1000 false chr1: 50302013-50303012 Medicago truncatula
Medtr1g111330 1.0kb downstream 1.0kb downstream 5295 true chr1: 50296718-50302012 Medicago truncatula
Medtr1g111330 1.0kb downstream 1.0kb downstream 1000 false chr1: 50296718-50297717 Medicago truncatula
Medtr1g111330 2.0kb upstream 2.0kb upstream 6295 true chr1: 50297718-50304012 Medicago truncatula
Medtr1g111330 2.0kb upstream 2.0kb upstream 2000 false chr1: 50302013-50304012 Medicago truncatula
Medtr1g111330 2.0kb downstream 2.0kb downstream 6295 true chr1: 50295718-50302012 Medicago truncatula
Medtr1g111330 2.0kb downstream 2.0kb downstream 2000 false chr1: 50295718-50297717 Medicago truncatula
Medtr1g111330 5.0kb upstream 5.0kb upstream 9295 true chr1: 50297718-50307012 Medicago truncatula
Medtr1g111330 5.0kb upstream 5.0kb upstream 5000 false chr1: 50302013-50307012 Medicago truncatula
Medtr1g111330 5.0kb downstream 5.0kb downstream 9295 true chr1: 50292718-50302012 Medicago truncatula
Medtr1g111330 5.0kb downstream 5.0kb downstream 5000 false chr1: 50292718-50297717 Medicago truncatula
Medtr1g111330 10.0kb upstream 10.0kb upstream 14295 true chr1: 50297718-50312012 Medicago truncatula
Medtr1g111330 10.0kb upstream 10.0kb upstream 10000 false chr1: 50302013-50312012 Medicago truncatula
Medtr1g111330 10.0kb downstream 10.0kb downstream 14295 true chr1: 50287718-50302012 Medicago truncatula
Medtr1g111330 10.0kb downstream 10.0kb downstream 10000 false chr1: 50287718-50297717 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301299 5265 Fabidae View MSA
124063041 5270 Rosid View MSA
123736673 5271 Pentapetalae View MSA
122792379 5272 Eudicot View MSA
122042832 5273 Angiosperm View MSA
121344178 5274 Embryophyte View MSA
123428325 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.086        
cufflinks 1.02       Low
cufflinks 1.74        
cufflinks 3.315       High
cufflinks 1.841        
cufflinks 1.729        
cufflinks 2.95       High
cufflinks 1.146       Low
cufflinks 2.779        

0 Strain