Gene : Medtr1g111100 M. truncatula Mt4.0v1

Defline:  (1 of 3) PTHR10219//PTHR10219:SF28 - GLYCOLIPID TRANSFER PROTEIN-RELATED Description:  glycolipid transfer protein
Genomic Order:  6318 Name:  ? Medtr1g111100
Secondary Identifier:  ? PAC:31092758

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g111100 0.5kb upstream 0.5kb upstream 3477 true chr1: 50177163-50180639 Medicago truncatula
Medtr1g111100 0.5kb upstream 0.5kb upstream 500 false chr1: 50177163-50177662 Medicago truncatula
Medtr1g111100 0.5kb downstream 0.5kb downstream 3477 true chr1: 50177663-50181139 Medicago truncatula
Medtr1g111100 0.5kb downstream 0.5kb downstream 500 false chr1: 50180640-50181139 Medicago truncatula
Medtr1g111100 1.0kb upstream 1.0kb upstream 3977 true chr1: 50176663-50180639 Medicago truncatula
Medtr1g111100 1.0kb upstream 1.0kb upstream 1000 false chr1: 50176663-50177662 Medicago truncatula
Medtr1g111100 1.0kb downstream 1.0kb downstream 3977 true chr1: 50177663-50181639 Medicago truncatula
Medtr1g111100 1.0kb downstream 1.0kb downstream 1000 false chr1: 50180640-50181639 Medicago truncatula
Medtr1g111100 2.0kb upstream 2.0kb upstream 4977 true chr1: 50175663-50180639 Medicago truncatula
Medtr1g111100 2.0kb upstream 2.0kb upstream 2000 false chr1: 50175663-50177662 Medicago truncatula
Medtr1g111100 2.0kb downstream 2.0kb downstream 4977 true chr1: 50177663-50182639 Medicago truncatula
Medtr1g111100 2.0kb downstream 2.0kb downstream 2000 false chr1: 50180640-50182639 Medicago truncatula
Medtr1g111100 5.0kb upstream 5.0kb upstream 7977 true chr1: 50172663-50180639 Medicago truncatula
Medtr1g111100 5.0kb upstream 5.0kb upstream 5000 false chr1: 50172663-50177662 Medicago truncatula
Medtr1g111100 5.0kb downstream 5.0kb downstream 7977 true chr1: 50177663-50185639 Medicago truncatula
Medtr1g111100 5.0kb downstream 5.0kb downstream 5000 false chr1: 50180640-50185639 Medicago truncatula
Medtr1g111100 10.0kb upstream 10.0kb upstream 12977 true chr1: 50167663-50180639 Medicago truncatula
Medtr1g111100 10.0kb upstream 10.0kb upstream 10000 false chr1: 50167663-50177662 Medicago truncatula
Medtr1g111100 10.0kb downstream 10.0kb downstream 12977 true chr1: 50177663-50190639 Medicago truncatula
Medtr1g111100 10.0kb downstream 10.0kb downstream 10000 false chr1: 50180640-50190639 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304761 5265 Fabidae View MSA
124065668 5270 Rosid View MSA
123750937 5271 Pentapetalae View MSA
122788350 5272 Eudicot View MSA
122047881 5273 Angiosperm View MSA
121344147 5274 Embryophyte View MSA
123426578 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.896     High  
cufflinks 3.187       Low
cufflinks 6.773        
cufflinks 7.754        
cufflinks 3.163       Low
cufflinks 14.53     High  
cufflinks 31.165     High High
cufflinks 3.027       Low
cufflinks 30.052     High High

0 Strain