Gene : Medtr1g110930 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31561:SF5 - 3-KETOACYL-COA SYNTHASE 5-RELATED Description:  3-ketoacyl-CoA synthase-like protein
Genomic Order:  6307 Name:  ? Medtr1g110930
Secondary Identifier:  ? PAC:31097222
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5080 Medicago truncatula pathologic  
Mtruncatula PWY-6433 Medicago truncatula pathologic  
Mtruncatula PWY-6598 Medicago truncatula pathologic  
Mtruncatula PWY-7036 Medicago truncatula pathologic  
Mtruncatula PWY-7601 Medicago truncatula pathologic  
Mtruncatula PWY-7619 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g110930 0.5kb upstream 0.5kb upstream 2539 true chr1: 50086559-50089097 Medicago truncatula
Medtr1g110930 0.5kb upstream 0.5kb upstream 500 false chr1: 50088598-50089097 Medicago truncatula
Medtr1g110930 0.5kb downstream 0.5kb downstream 2539 true chr1: 50086059-50088597 Medicago truncatula
Medtr1g110930 0.5kb downstream 0.5kb downstream 500 false chr1: 50086059-50086558 Medicago truncatula
Medtr1g110930 1.0kb upstream 1.0kb upstream 3039 true chr1: 50086559-50089597 Medicago truncatula
Medtr1g110930 1.0kb upstream 1.0kb upstream 1000 false chr1: 50088598-50089597 Medicago truncatula
Medtr1g110930 1.0kb downstream 1.0kb downstream 3039 true chr1: 50085559-50088597 Medicago truncatula
Medtr1g110930 1.0kb downstream 1.0kb downstream 1000 false chr1: 50085559-50086558 Medicago truncatula
Medtr1g110930 2.0kb upstream 2.0kb upstream 4039 true chr1: 50086559-50090597 Medicago truncatula
Medtr1g110930 2.0kb upstream 2.0kb upstream 2000 false chr1: 50088598-50090597 Medicago truncatula
Medtr1g110930 2.0kb downstream 2.0kb downstream 4039 true chr1: 50084559-50088597 Medicago truncatula
Medtr1g110930 2.0kb downstream 2.0kb downstream 2000 false chr1: 50084559-50086558 Medicago truncatula
Medtr1g110930 5.0kb upstream 5.0kb upstream 7039 true chr1: 50086559-50093597 Medicago truncatula
Medtr1g110930 5.0kb upstream 5.0kb upstream 5000 false chr1: 50088598-50093597 Medicago truncatula
Medtr1g110930 5.0kb downstream 5.0kb downstream 7039 true chr1: 50081559-50088597 Medicago truncatula
Medtr1g110930 5.0kb downstream 5.0kb downstream 5000 false chr1: 50081559-50086558 Medicago truncatula
Medtr1g110930 10.0kb upstream 10.0kb upstream 12039 true chr1: 50086559-50098597 Medicago truncatula
Medtr1g110930 10.0kb upstream 10.0kb upstream 10000 false chr1: 50088598-50098597 Medicago truncatula
Medtr1g110930 10.0kb downstream 10.0kb downstream 12039 true chr1: 50076559-50088597 Medicago truncatula
Medtr1g110930 10.0kb downstream 10.0kb downstream 10000 false chr1: 50076559-50086558 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308026 5265 Fabidae View MSA
124074382 5270 Rosid View MSA
123744253 5271 Pentapetalae View MSA
122788881 5272 Eudicot View MSA
122042493 5273 Angiosperm View MSA
121309978 5274 Embryophyte View MSA
123347592 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 51.178     High  
cufflinks 16.846     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 40.792     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low Low
cufflinks 21.859     High  
cufflinks 0.018     Low Low

0 Strain