Gene : Medtr1g100880 M. truncatula Mt4.0v1
Description:  ATP-binding protein, putative Genomic Order:  5624
Name:  ? Medtr1g100880 Secondary Identifier:  ? PAC:31094791
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g100880 0.5kb upstream 0.5kb upstream 3318 true chr1: 45291982-45295299 Medicago truncatula
Medtr1g100880 0.5kb upstream 0.5kb upstream 500 false chr1: 45291982-45292481 Medicago truncatula
Medtr1g100880 0.5kb downstream 0.5kb downstream 3318 true chr1: 45292482-45295799 Medicago truncatula
Medtr1g100880 0.5kb downstream 0.5kb downstream 500 false chr1: 45295300-45295799 Medicago truncatula
Medtr1g100880 1.0kb upstream 1.0kb upstream 3818 true chr1: 45291482-45295299 Medicago truncatula
Medtr1g100880 1.0kb upstream 1.0kb upstream 1000 false chr1: 45291482-45292481 Medicago truncatula
Medtr1g100880 1.0kb downstream 1.0kb downstream 3818 true chr1: 45292482-45296299 Medicago truncatula
Medtr1g100880 1.0kb downstream 1.0kb downstream 1000 false chr1: 45295300-45296299 Medicago truncatula
Medtr1g100880 2.0kb upstream 2.0kb upstream 4818 true chr1: 45290482-45295299 Medicago truncatula
Medtr1g100880 2.0kb upstream 2.0kb upstream 2000 false chr1: 45290482-45292481 Medicago truncatula
Medtr1g100880 2.0kb downstream 2.0kb downstream 4818 true chr1: 45292482-45297299 Medicago truncatula
Medtr1g100880 2.0kb downstream 2.0kb downstream 2000 false chr1: 45295300-45297299 Medicago truncatula
Medtr1g100880 5.0kb upstream 5.0kb upstream 7818 true chr1: 45287482-45295299 Medicago truncatula
Medtr1g100880 5.0kb upstream 5.0kb upstream 5000 false chr1: 45287482-45292481 Medicago truncatula
Medtr1g100880 5.0kb downstream 5.0kb downstream 7818 true chr1: 45292482-45300299 Medicago truncatula
Medtr1g100880 5.0kb downstream 5.0kb downstream 5000 false chr1: 45295300-45300299 Medicago truncatula
Medtr1g100880 10.0kb upstream 10.0kb upstream 12818 true chr1: 45282482-45295299 Medicago truncatula
Medtr1g100880 10.0kb upstream 10.0kb upstream 10000 false chr1: 45282482-45292481 Medicago truncatula
Medtr1g100880 10.0kb downstream 10.0kb downstream 12818 true chr1: 45292482-45305299 Medicago truncatula
Medtr1g100880 10.0kb downstream 10.0kb downstream 10000 false chr1: 45295300-45305299 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310496 5265 Fabidae View MSA
124063807 5270 Rosid View MSA
123741228 5271 Pentapetalae View MSA
122785910 5272 Eudicot View MSA
122041630 5273 Angiosperm View MSA
121309873 5274 Embryophyte View MSA
123347512 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.161        
cufflinks 0.181        
cufflinks 0.169        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.319        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 0.167        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain