Gene : Medtr1g100777 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10015:SF168 - HEAT STRESS TRANSCRIPTION FACTOR B-2A Description:  heat shock transcription factor B2A
Genomic Order:  5682 Name:  ? Medtr1g100777
Secondary Identifier:  ? PAC:31098319
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g100777 0.5kb upstream 0.5kb upstream 1988 true chr1: 45703859-45705846 Medicago truncatula
Medtr1g100777 0.5kb upstream 0.5kb upstream 500 false chr1: 45703859-45704358 Medicago truncatula
Medtr1g100777 0.5kb downstream 0.5kb downstream 1988 true chr1: 45704359-45706346 Medicago truncatula
Medtr1g100777 0.5kb downstream 0.5kb downstream 500 false chr1: 45705847-45706346 Medicago truncatula
Medtr1g100777 1.0kb upstream 1.0kb upstream 2488 true chr1: 45703359-45705846 Medicago truncatula
Medtr1g100777 1.0kb upstream 1.0kb upstream 1000 false chr1: 45703359-45704358 Medicago truncatula
Medtr1g100777 1.0kb downstream 1.0kb downstream 2488 true chr1: 45704359-45706846 Medicago truncatula
Medtr1g100777 1.0kb downstream 1.0kb downstream 1000 false chr1: 45705847-45706846 Medicago truncatula
Medtr1g100777 2.0kb upstream 2.0kb upstream 3488 true chr1: 45702359-45705846 Medicago truncatula
Medtr1g100777 2.0kb upstream 2.0kb upstream 2000 false chr1: 45702359-45704358 Medicago truncatula
Medtr1g100777 2.0kb downstream 2.0kb downstream 3488 true chr1: 45704359-45707846 Medicago truncatula
Medtr1g100777 2.0kb downstream 2.0kb downstream 2000 false chr1: 45705847-45707846 Medicago truncatula
Medtr1g100777 5.0kb upstream 5.0kb upstream 6488 true chr1: 45699359-45705846 Medicago truncatula
Medtr1g100777 5.0kb upstream 5.0kb upstream 5000 false chr1: 45699359-45704358 Medicago truncatula
Medtr1g100777 5.0kb downstream 5.0kb downstream 6488 true chr1: 45704359-45710846 Medicago truncatula
Medtr1g100777 5.0kb downstream 5.0kb downstream 5000 false chr1: 45705847-45710846 Medicago truncatula
Medtr1g100777 10.0kb upstream 10.0kb upstream 11488 true chr1: 45694359-45705846 Medicago truncatula
Medtr1g100777 10.0kb upstream 10.0kb upstream 10000 false chr1: 45694359-45704358 Medicago truncatula
Medtr1g100777 10.0kb downstream 10.0kb downstream 11488 true chr1: 45704359-45715846 Medicago truncatula
Medtr1g100777 10.0kb downstream 10.0kb downstream 10000 false chr1: 45705847-45715846 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296745 5265 Fabidae View MSA
124071788 5270 Rosid View MSA
123750823 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.367     High  
cufflinks 13.206     High  
cufflinks 17.766     High  
cufflinks 10.393     High  
cufflinks 12.679     High  
cufflinks 7.1       Low
cufflinks 16.799     High  
cufflinks 23.082     High High
cufflinks 16.123     High  

0 Strain