Gene : Medtr1g100623 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Description:  hypothetical protein
Genomic Order:  5658 Name:  ? Medtr1g100623
Secondary Identifier:  ? PAC:31098239
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g100623 0.5kb upstream 0.5kb upstream 4946 true chr1: 45542374-45547319 Medicago truncatula
Medtr1g100623 0.5kb upstream 0.5kb upstream 500 false chr1: 45546820-45547319 Medicago truncatula
Medtr1g100623 0.5kb downstream 0.5kb downstream 4946 true chr1: 45541874-45546819 Medicago truncatula
Medtr1g100623 0.5kb downstream 0.5kb downstream 500 false chr1: 45541874-45542373 Medicago truncatula
Medtr1g100623 1.0kb upstream 1.0kb upstream 5446 true chr1: 45542374-45547819 Medicago truncatula
Medtr1g100623 1.0kb upstream 1.0kb upstream 1000 false chr1: 45546820-45547819 Medicago truncatula
Medtr1g100623 1.0kb downstream 1.0kb downstream 5446 true chr1: 45541374-45546819 Medicago truncatula
Medtr1g100623 1.0kb downstream 1.0kb downstream 1000 false chr1: 45541374-45542373 Medicago truncatula
Medtr1g100623 2.0kb upstream 2.0kb upstream 6446 true chr1: 45542374-45548819 Medicago truncatula
Medtr1g100623 2.0kb upstream 2.0kb upstream 2000 false chr1: 45546820-45548819 Medicago truncatula
Medtr1g100623 2.0kb downstream 2.0kb downstream 6446 true chr1: 45540374-45546819 Medicago truncatula
Medtr1g100623 2.0kb downstream 2.0kb downstream 2000 false chr1: 45540374-45542373 Medicago truncatula
Medtr1g100623 5.0kb upstream 5.0kb upstream 9446 true chr1: 45542374-45551819 Medicago truncatula
Medtr1g100623 5.0kb upstream 5.0kb upstream 5000 false chr1: 45546820-45551819 Medicago truncatula
Medtr1g100623 5.0kb downstream 5.0kb downstream 9446 true chr1: 45537374-45546819 Medicago truncatula
Medtr1g100623 5.0kb downstream 5.0kb downstream 5000 false chr1: 45537374-45542373 Medicago truncatula
Medtr1g100623 10.0kb upstream 10.0kb upstream 14446 true chr1: 45542374-45556819 Medicago truncatula
Medtr1g100623 10.0kb upstream 10.0kb upstream 10000 false chr1: 45546820-45556819 Medicago truncatula
Medtr1g100623 10.0kb downstream 10.0kb downstream 14446 true chr1: 45532374-45546819 Medicago truncatula
Medtr1g100623 10.0kb downstream 10.0kb downstream 10000 false chr1: 45532374-45542373 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313287 5265 Fabidae View MSA
124069753 5270 Rosid View MSA
123745202 5271 Pentapetalae View MSA
122785813 5272 Eudicot View MSA
122050504 5273 Angiosperm View MSA
121311951 5274 Embryophyte View MSA
123349176 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.657        
cufflinks 76.631     High High
cufflinks 21.286     High  
cufflinks 8.08        
cufflinks 9.75        
cufflinks 4.534       Low
cufflinks 12.21     High  
cufflinks 26.047     High  
cufflinks 9.717        

0 Strain