Gene : Medtr1g102680 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11772:SF8 - ALUMINIUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS-RELATED Description:  aluminum induced protein with YGL and LRDR motif protein
Genomic Order:  5788 Name:  ? Medtr1g102680
Secondary Identifier:  ? PAC:31093677
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g102680 0.5kb upstream 0.5kb upstream 3421 true chr1: 46403350-46406770 Medicago truncatula
Medtr1g102680 0.5kb upstream 0.5kb upstream 500 false chr1: 46406271-46406770 Medicago truncatula
Medtr1g102680 0.5kb downstream 0.5kb downstream 3421 true chr1: 46402850-46406270 Medicago truncatula
Medtr1g102680 0.5kb downstream 0.5kb downstream 500 false chr1: 46402850-46403349 Medicago truncatula
Medtr1g102680 1.0kb upstream 1.0kb upstream 3921 true chr1: 46403350-46407270 Medicago truncatula
Medtr1g102680 1.0kb upstream 1.0kb upstream 1000 false chr1: 46406271-46407270 Medicago truncatula
Medtr1g102680 1.0kb downstream 1.0kb downstream 3921 true chr1: 46402350-46406270 Medicago truncatula
Medtr1g102680 1.0kb downstream 1.0kb downstream 1000 false chr1: 46402350-46403349 Medicago truncatula
Medtr1g102680 2.0kb upstream 2.0kb upstream 4921 true chr1: 46403350-46408270 Medicago truncatula
Medtr1g102680 2.0kb upstream 2.0kb upstream 2000 false chr1: 46406271-46408270 Medicago truncatula
Medtr1g102680 2.0kb downstream 2.0kb downstream 4921 true chr1: 46401350-46406270 Medicago truncatula
Medtr1g102680 2.0kb downstream 2.0kb downstream 2000 false chr1: 46401350-46403349 Medicago truncatula
Medtr1g102680 5.0kb upstream 5.0kb upstream 7921 true chr1: 46403350-46411270 Medicago truncatula
Medtr1g102680 5.0kb upstream 5.0kb upstream 5000 false chr1: 46406271-46411270 Medicago truncatula
Medtr1g102680 5.0kb downstream 5.0kb downstream 7921 true chr1: 46398350-46406270 Medicago truncatula
Medtr1g102680 5.0kb downstream 5.0kb downstream 5000 false chr1: 46398350-46403349 Medicago truncatula
Medtr1g102680 10.0kb upstream 10.0kb upstream 12921 true chr1: 46403350-46416270 Medicago truncatula
Medtr1g102680 10.0kb upstream 10.0kb upstream 10000 false chr1: 46406271-46416270 Medicago truncatula
Medtr1g102680 10.0kb downstream 10.0kb downstream 12921 true chr1: 46393350-46406270 Medicago truncatula
Medtr1g102680 10.0kb downstream 10.0kb downstream 10000 false chr1: 46393350-46403349 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315015 5265 Fabidae View MSA
124062275 5270 Rosid View MSA
123741924 5271 Pentapetalae View MSA
122789894 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.886       Low
cufflinks 13.669     High  
cufflinks 12.694     High  
cufflinks 13.787     High  
cufflinks 18.221     High  
cufflinks 5.786       Low
cufflinks 15.029     High  
cufflinks 10.427     High  
cufflinks 27.215     High High

0 Strain