Gene : Medtr1g102550 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11055//PTHR11055:SF18 - ADENYLSULFATE KINASE/SULFATE ADENYLTRANSFERASE Description:  ATP sulfurylase
Genomic Order:  5777 Name:  ? Medtr1g102550
Secondary Identifier:  ? PAC:31095965
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5340 Medicago truncatula pathologic  
Mtruncatula PWY-6932 Medicago truncatula pathologic  
Mtruncatula SULFMETII-PWY Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g102550 0.5kb upstream 0.5kb upstream 4611 true chr1: 46329753-46334363 Medicago truncatula
Medtr1g102550 0.5kb upstream 0.5kb upstream 500 false chr1: 46333864-46334363 Medicago truncatula
Medtr1g102550 0.5kb downstream 0.5kb downstream 4611 true chr1: 46329253-46333863 Medicago truncatula
Medtr1g102550 0.5kb downstream 0.5kb downstream 500 false chr1: 46329253-46329752 Medicago truncatula
Medtr1g102550 1.0kb upstream 1.0kb upstream 5111 true chr1: 46329753-46334863 Medicago truncatula
Medtr1g102550 1.0kb upstream 1.0kb upstream 1000 false chr1: 46333864-46334863 Medicago truncatula
Medtr1g102550 1.0kb downstream 1.0kb downstream 5111 true chr1: 46328753-46333863 Medicago truncatula
Medtr1g102550 1.0kb downstream 1.0kb downstream 1000 false chr1: 46328753-46329752 Medicago truncatula
Medtr1g102550 2.0kb upstream 2.0kb upstream 6111 true chr1: 46329753-46335863 Medicago truncatula
Medtr1g102550 2.0kb upstream 2.0kb upstream 2000 false chr1: 46333864-46335863 Medicago truncatula
Medtr1g102550 2.0kb downstream 2.0kb downstream 6111 true chr1: 46327753-46333863 Medicago truncatula
Medtr1g102550 2.0kb downstream 2.0kb downstream 2000 false chr1: 46327753-46329752 Medicago truncatula
Medtr1g102550 5.0kb upstream 5.0kb upstream 9111 true chr1: 46329753-46338863 Medicago truncatula
Medtr1g102550 5.0kb upstream 5.0kb upstream 5000 false chr1: 46333864-46338863 Medicago truncatula
Medtr1g102550 5.0kb downstream 5.0kb downstream 9111 true chr1: 46324753-46333863 Medicago truncatula
Medtr1g102550 5.0kb downstream 5.0kb downstream 5000 false chr1: 46324753-46329752 Medicago truncatula
Medtr1g102550 10.0kb upstream 10.0kb upstream 14111 true chr1: 46329753-46343863 Medicago truncatula
Medtr1g102550 10.0kb upstream 10.0kb upstream 10000 false chr1: 46333864-46343863 Medicago truncatula
Medtr1g102550 10.0kb downstream 10.0kb downstream 14111 true chr1: 46319753-46333863 Medicago truncatula
Medtr1g102550 10.0kb downstream 10.0kb downstream 10000 false chr1: 46319753-46329752 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299376 5265 Fabidae View MSA
124066683 5270 Rosid View MSA
123736470 5271 Pentapetalae View MSA
122791658 5272 Eudicot View MSA
122043781 5273 Angiosperm View MSA
121349339 5274 Embryophyte View MSA
123426585 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.716     High  
cufflinks 57.796     High  
cufflinks 60.167     High  
cufflinks 756.076     High High
cufflinks 63.484     High  
cufflinks 460.728     High High
cufflinks 154.091     High  
cufflinks 44.41     High Low
cufflinks 186.546     High  

0 Strain