Gene : Medtr1g102630 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22891:SF45 - PROTEIN ARGONAUTE 10 Description:  eukaryotic translation initiation factor 2c
Genomic Order:  5784 Name:  ? Medtr1g102630
Secondary Identifier:  ? PAC:31098058
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g102630 0.5kb upstream 0.5kb upstream 7579 true chr1: 46370825-46378403 Medicago truncatula
Medtr1g102630 0.5kb upstream 0.5kb upstream 500 false chr1: 46370825-46371324 Medicago truncatula
Medtr1g102630 0.5kb downstream 0.5kb downstream 7579 true chr1: 46371325-46378903 Medicago truncatula
Medtr1g102630 0.5kb downstream 0.5kb downstream 500 false chr1: 46378404-46378903 Medicago truncatula
Medtr1g102630 1.0kb upstream 1.0kb upstream 8079 true chr1: 46370325-46378403 Medicago truncatula
Medtr1g102630 1.0kb upstream 1.0kb upstream 1000 false chr1: 46370325-46371324 Medicago truncatula
Medtr1g102630 1.0kb downstream 1.0kb downstream 8079 true chr1: 46371325-46379403 Medicago truncatula
Medtr1g102630 1.0kb downstream 1.0kb downstream 1000 false chr1: 46378404-46379403 Medicago truncatula
Medtr1g102630 2.0kb upstream 2.0kb upstream 9079 true chr1: 46369325-46378403 Medicago truncatula
Medtr1g102630 2.0kb upstream 2.0kb upstream 2000 false chr1: 46369325-46371324 Medicago truncatula
Medtr1g102630 2.0kb downstream 2.0kb downstream 9079 true chr1: 46371325-46380403 Medicago truncatula
Medtr1g102630 2.0kb downstream 2.0kb downstream 2000 false chr1: 46378404-46380403 Medicago truncatula
Medtr1g102630 5.0kb upstream 5.0kb upstream 12079 true chr1: 46366325-46378403 Medicago truncatula
Medtr1g102630 5.0kb upstream 5.0kb upstream 5000 false chr1: 46366325-46371324 Medicago truncatula
Medtr1g102630 5.0kb downstream 5.0kb downstream 12079 true chr1: 46371325-46383403 Medicago truncatula
Medtr1g102630 5.0kb downstream 5.0kb downstream 5000 false chr1: 46378404-46383403 Medicago truncatula
Medtr1g102630 10.0kb upstream 10.0kb upstream 17079 true chr1: 46361325-46378403 Medicago truncatula
Medtr1g102630 10.0kb upstream 10.0kb upstream 10000 false chr1: 46361325-46371324 Medicago truncatula
Medtr1g102630 10.0kb downstream 10.0kb downstream 17079 true chr1: 46371325-46388403 Medicago truncatula
Medtr1g102630 10.0kb downstream 10.0kb downstream 10000 false chr1: 46378404-46388403 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306623 5265 Fabidae View MSA
124061400 5270 Rosid View MSA
123738566 5271 Pentapetalae View MSA
122790150 5272 Eudicot View MSA
122045279 5273 Angiosperm View MSA
121345149 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.308       Low
cufflinks 1.399        
cufflinks 1.538        
cufflinks 0.361       Low
cufflinks 1.509        
cufflinks 1.219        
cufflinks 0.699        
cufflinks 1.527        
cufflinks 0.544        

0 Strain