Gene : Medtr1g102420 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31718:SF8 - EMBRYO-SPECIFIC PROTEIN 3 Description:  embryo-specific protein
Genomic Order:  5766 Name:  ? Medtr1g102420
Secondary Identifier:  ? PAC:31100104
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g102420 0.5kb upstream 0.5kb upstream 3025 true chr1: 46251012-46254036 Medicago truncatula
Medtr1g102420 0.5kb upstream 0.5kb upstream 500 false chr1: 46253537-46254036 Medicago truncatula
Medtr1g102420 0.5kb downstream 0.5kb downstream 3025 true chr1: 46250512-46253536 Medicago truncatula
Medtr1g102420 0.5kb downstream 0.5kb downstream 500 false chr1: 46250512-46251011 Medicago truncatula
Medtr1g102420 1.0kb upstream 1.0kb upstream 3525 true chr1: 46251012-46254536 Medicago truncatula
Medtr1g102420 1.0kb upstream 1.0kb upstream 1000 false chr1: 46253537-46254536 Medicago truncatula
Medtr1g102420 1.0kb downstream 1.0kb downstream 3525 true chr1: 46250012-46253536 Medicago truncatula
Medtr1g102420 1.0kb downstream 1.0kb downstream 1000 false chr1: 46250012-46251011 Medicago truncatula
Medtr1g102420 2.0kb upstream 2.0kb upstream 4525 true chr1: 46251012-46255536 Medicago truncatula
Medtr1g102420 2.0kb upstream 2.0kb upstream 2000 false chr1: 46253537-46255536 Medicago truncatula
Medtr1g102420 2.0kb downstream 2.0kb downstream 4525 true chr1: 46249012-46253536 Medicago truncatula
Medtr1g102420 2.0kb downstream 2.0kb downstream 2000 false chr1: 46249012-46251011 Medicago truncatula
Medtr1g102420 5.0kb upstream 5.0kb upstream 7525 true chr1: 46251012-46258536 Medicago truncatula
Medtr1g102420 5.0kb upstream 5.0kb upstream 5000 false chr1: 46253537-46258536 Medicago truncatula
Medtr1g102420 5.0kb downstream 5.0kb downstream 7525 true chr1: 46246012-46253536 Medicago truncatula
Medtr1g102420 5.0kb downstream 5.0kb downstream 5000 false chr1: 46246012-46251011 Medicago truncatula
Medtr1g102420 10.0kb upstream 10.0kb upstream 12525 true chr1: 46251012-46263536 Medicago truncatula
Medtr1g102420 10.0kb upstream 10.0kb upstream 10000 false chr1: 46253537-46263536 Medicago truncatula
Medtr1g102420 10.0kb downstream 10.0kb downstream 12525 true chr1: 46241012-46253536 Medicago truncatula
Medtr1g102420 10.0kb downstream 10.0kb downstream 10000 false chr1: 46241012-46251011 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310019 5265 Fabidae View MSA
124070203 5270 Rosid View MSA
123746143 5271 Pentapetalae View MSA
122796857 5272 Eudicot View MSA
122048426 5273 Angiosperm View MSA
121310965 5274 Embryophyte View MSA
123348331 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.566     High  
cufflinks 14.332     High  
cufflinks 10.208     High Low
cufflinks 15.998     High High
cufflinks 10.668     High  
cufflinks 11.03     High  
cufflinks 15.192     High High
cufflinks 10.983     High  
cufflinks 12.1     High  

0 Strain