Gene : Medtr1g102370 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR13935:SF54 - TRANSCRIPTION FACTOR BHLH118-RELATED Description:  transcription factor
Genomic Order:  5762 Name:  ? Medtr1g102370
Secondary Identifier:  ? PAC:31096827
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g102370 0.5kb upstream 0.5kb upstream 2165 true chr1: 46229149-46231313 Medicago truncatula
Medtr1g102370 0.5kb upstream 0.5kb upstream 500 false chr1: 46230814-46231313 Medicago truncatula
Medtr1g102370 0.5kb downstream 0.5kb downstream 2165 true chr1: 46228649-46230813 Medicago truncatula
Medtr1g102370 0.5kb downstream 0.5kb downstream 500 false chr1: 46228649-46229148 Medicago truncatula
Medtr1g102370 1.0kb upstream 1.0kb upstream 2665 true chr1: 46229149-46231813 Medicago truncatula
Medtr1g102370 1.0kb upstream 1.0kb upstream 1000 false chr1: 46230814-46231813 Medicago truncatula
Medtr1g102370 1.0kb downstream 1.0kb downstream 2665 true chr1: 46228149-46230813 Medicago truncatula
Medtr1g102370 1.0kb downstream 1.0kb downstream 1000 false chr1: 46228149-46229148 Medicago truncatula
Medtr1g102370 2.0kb upstream 2.0kb upstream 3665 true chr1: 46229149-46232813 Medicago truncatula
Medtr1g102370 2.0kb upstream 2.0kb upstream 2000 false chr1: 46230814-46232813 Medicago truncatula
Medtr1g102370 2.0kb downstream 2.0kb downstream 3665 true chr1: 46227149-46230813 Medicago truncatula
Medtr1g102370 2.0kb downstream 2.0kb downstream 2000 false chr1: 46227149-46229148 Medicago truncatula
Medtr1g102370 5.0kb upstream 5.0kb upstream 6665 true chr1: 46229149-46235813 Medicago truncatula
Medtr1g102370 5.0kb upstream 5.0kb upstream 5000 false chr1: 46230814-46235813 Medicago truncatula
Medtr1g102370 5.0kb downstream 5.0kb downstream 6665 true chr1: 46224149-46230813 Medicago truncatula
Medtr1g102370 5.0kb downstream 5.0kb downstream 5000 false chr1: 46224149-46229148 Medicago truncatula
Medtr1g102370 10.0kb upstream 10.0kb upstream 11665 true chr1: 46229149-46240813 Medicago truncatula
Medtr1g102370 10.0kb upstream 10.0kb upstream 10000 false chr1: 46230814-46240813 Medicago truncatula
Medtr1g102370 10.0kb downstream 10.0kb downstream 11665 true chr1: 46219149-46230813 Medicago truncatula
Medtr1g102370 10.0kb downstream 10.0kb downstream 10000 false chr1: 46219149-46229148 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314557 5265 Fabidae View MSA
124073139 5270 Rosid View MSA
123750941 5271 Pentapetalae View MSA
122792125 5272 Eudicot View MSA
122050150 5273 Angiosperm View MSA
121311764 5274 Embryophyte View MSA
123349017 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.801        
cufflinks 1.602        
cufflinks 1.253       Low
cufflinks 6.399        
cufflinks 1.111       Low
cufflinks 12.76     High High
cufflinks 16.239     High High
cufflinks 1.351        
cufflinks 8.007        

0 Strain