Gene : Medtr1g104520 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  5885
Name:  ? Medtr1g104520 Secondary Identifier:  ? PAC:31093860
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g104520 0.5kb upstream 0.5kb upstream 1377 true chr1: 47066736-47068112 Medicago truncatula
Medtr1g104520 0.5kb upstream 0.5kb upstream 500 false chr1: 47067613-47068112 Medicago truncatula
Medtr1g104520 0.5kb downstream 0.5kb downstream 1377 true chr1: 47066236-47067612 Medicago truncatula
Medtr1g104520 0.5kb downstream 0.5kb downstream 500 false chr1: 47066236-47066735 Medicago truncatula
Medtr1g104520 1.0kb upstream 1.0kb upstream 1877 true chr1: 47066736-47068612 Medicago truncatula
Medtr1g104520 1.0kb upstream 1.0kb upstream 1000 false chr1: 47067613-47068612 Medicago truncatula
Medtr1g104520 1.0kb downstream 1.0kb downstream 1877 true chr1: 47065736-47067612 Medicago truncatula
Medtr1g104520 1.0kb downstream 1.0kb downstream 1000 false chr1: 47065736-47066735 Medicago truncatula
Medtr1g104520 2.0kb upstream 2.0kb upstream 2877 true chr1: 47066736-47069612 Medicago truncatula
Medtr1g104520 2.0kb upstream 2.0kb upstream 2000 false chr1: 47067613-47069612 Medicago truncatula
Medtr1g104520 2.0kb downstream 2.0kb downstream 2877 true chr1: 47064736-47067612 Medicago truncatula
Medtr1g104520 2.0kb downstream 2.0kb downstream 2000 false chr1: 47064736-47066735 Medicago truncatula
Medtr1g104520 5.0kb upstream 5.0kb upstream 5877 true chr1: 47066736-47072612 Medicago truncatula
Medtr1g104520 5.0kb upstream 5.0kb upstream 5000 false chr1: 47067613-47072612 Medicago truncatula
Medtr1g104520 5.0kb downstream 5.0kb downstream 5877 true chr1: 47061736-47067612 Medicago truncatula
Medtr1g104520 5.0kb downstream 5.0kb downstream 5000 false chr1: 47061736-47066735 Medicago truncatula
Medtr1g104520 10.0kb upstream 10.0kb upstream 10877 true chr1: 47066736-47077612 Medicago truncatula
Medtr1g104520 10.0kb upstream 10.0kb upstream 10000 false chr1: 47067613-47077612 Medicago truncatula
Medtr1g104520 10.0kb downstream 10.0kb downstream 10877 true chr1: 47056736-47067612 Medicago truncatula
Medtr1g104520 10.0kb downstream 10.0kb downstream 10000 false chr1: 47056736-47066735 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312497 5265 Fabidae View MSA
124067133 5270 Rosid View MSA
123747217 5271 Pentapetalae View MSA
122796320 5272 Eudicot View MSA
122041780 5273 Angiosperm View MSA
121350736 5274 Embryophyte View MSA
123381864 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.287       Low
cufflinks 1.149        
cufflinks 1.866        
cufflinks 11.892     High High
cufflinks 3.732        
cufflinks 18.682     High High
cufflinks 2.491        
cufflinks 2.603        
cufflinks 4.306        

0 Strain