Gene : Medtr1g103830 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24098:SF10 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN-RELATED Description:  RING/FYVE/PHD zinc finger protein, putative
Genomic Order:  5876 Name:  ? Medtr1g103830
Secondary Identifier:  ? PAC:31096442
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g103830 0.5kb upstream 0.5kb upstream 9886 true chr1: 46987224-46997109 Medicago truncatula
Medtr1g103830 0.5kb upstream 0.5kb upstream 500 false chr1: 46996610-46997109 Medicago truncatula
Medtr1g103830 0.5kb downstream 0.5kb downstream 9886 true chr1: 46986724-46996609 Medicago truncatula
Medtr1g103830 0.5kb downstream 0.5kb downstream 500 false chr1: 46986724-46987223 Medicago truncatula
Medtr1g103830 1.0kb upstream 1.0kb upstream 10386 true chr1: 46987224-46997609 Medicago truncatula
Medtr1g103830 1.0kb upstream 1.0kb upstream 1000 false chr1: 46996610-46997609 Medicago truncatula
Medtr1g103830 1.0kb downstream 1.0kb downstream 10386 true chr1: 46986224-46996609 Medicago truncatula
Medtr1g103830 1.0kb downstream 1.0kb downstream 1000 false chr1: 46986224-46987223 Medicago truncatula
Medtr1g103830 2.0kb upstream 2.0kb upstream 11386 true chr1: 46987224-46998609 Medicago truncatula
Medtr1g103830 2.0kb upstream 2.0kb upstream 2000 false chr1: 46996610-46998609 Medicago truncatula
Medtr1g103830 2.0kb downstream 2.0kb downstream 11386 true chr1: 46985224-46996609 Medicago truncatula
Medtr1g103830 2.0kb downstream 2.0kb downstream 2000 false chr1: 46985224-46987223 Medicago truncatula
Medtr1g103830 5.0kb upstream 5.0kb upstream 14386 true chr1: 46987224-47001609 Medicago truncatula
Medtr1g103830 5.0kb upstream 5.0kb upstream 5000 false chr1: 46996610-47001609 Medicago truncatula
Medtr1g103830 5.0kb downstream 5.0kb downstream 14386 true chr1: 46982224-46996609 Medicago truncatula
Medtr1g103830 5.0kb downstream 5.0kb downstream 5000 false chr1: 46982224-46987223 Medicago truncatula
Medtr1g103830 10.0kb upstream 10.0kb upstream 19386 true chr1: 46987224-47006609 Medicago truncatula
Medtr1g103830 10.0kb upstream 10.0kb upstream 10000 false chr1: 46996610-47006609 Medicago truncatula
Medtr1g103830 10.0kb downstream 10.0kb downstream 19386 true chr1: 46977224-46996609 Medicago truncatula
Medtr1g103830 10.0kb downstream 10.0kb downstream 10000 false chr1: 46977224-46987223 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308492 5265 Fabidae View MSA
124073336 5270 Rosid View MSA
123742253 5271 Pentapetalae View MSA
122793058 5272 Eudicot View MSA
122043128 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.702        
cufflinks 5.988        
cufflinks 6.823        
cufflinks 2.508       Low
cufflinks 6.299        
cufflinks 2.895       Low
cufflinks 5.537        
cufflinks 5.352        
cufflinks 4.068        

0 Strain