Gene : Medtr1g103690 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10314//PTHR10314:SF101 - SER/THR DEHYDRATASE, TRP SYNTHASE Description:  O-acetylserine (thiol) lyase
Genomic Order:  5865 Name:  ? Medtr1g103690
Secondary Identifier:  ? PAC:31098347
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CYSTSYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-6936 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g103690 0.5kb upstream 0.5kb upstream 2982 true chr1: 46935877-46938858 Medicago truncatula
Medtr1g103690 0.5kb upstream 0.5kb upstream 500 false chr1: 46938359-46938858 Medicago truncatula
Medtr1g103690 0.5kb downstream 0.5kb downstream 2982 true chr1: 46935377-46938358 Medicago truncatula
Medtr1g103690 0.5kb downstream 0.5kb downstream 500 false chr1: 46935377-46935876 Medicago truncatula
Medtr1g103690 1.0kb upstream 1.0kb upstream 3482 true chr1: 46935877-46939358 Medicago truncatula
Medtr1g103690 1.0kb upstream 1.0kb upstream 1000 false chr1: 46938359-46939358 Medicago truncatula
Medtr1g103690 1.0kb downstream 1.0kb downstream 3482 true chr1: 46934877-46938358 Medicago truncatula
Medtr1g103690 1.0kb downstream 1.0kb downstream 1000 false chr1: 46934877-46935876 Medicago truncatula
Medtr1g103690 2.0kb upstream 2.0kb upstream 4482 true chr1: 46935877-46940358 Medicago truncatula
Medtr1g103690 2.0kb upstream 2.0kb upstream 2000 false chr1: 46938359-46940358 Medicago truncatula
Medtr1g103690 2.0kb downstream 2.0kb downstream 4482 true chr1: 46933877-46938358 Medicago truncatula
Medtr1g103690 2.0kb downstream 2.0kb downstream 2000 false chr1: 46933877-46935876 Medicago truncatula
Medtr1g103690 5.0kb upstream 5.0kb upstream 7482 true chr1: 46935877-46943358 Medicago truncatula
Medtr1g103690 5.0kb upstream 5.0kb upstream 5000 false chr1: 46938359-46943358 Medicago truncatula
Medtr1g103690 5.0kb downstream 5.0kb downstream 7482 true chr1: 46930877-46938358 Medicago truncatula
Medtr1g103690 5.0kb downstream 5.0kb downstream 5000 false chr1: 46930877-46935876 Medicago truncatula
Medtr1g103690 10.0kb upstream 10.0kb upstream 12482 true chr1: 46935877-46948358 Medicago truncatula
Medtr1g103690 10.0kb upstream 10.0kb upstream 10000 false chr1: 46938359-46948358 Medicago truncatula
Medtr1g103690 10.0kb downstream 10.0kb downstream 12482 true chr1: 46925877-46938358 Medicago truncatula
Medtr1g103690 10.0kb downstream 10.0kb downstream 10000 false chr1: 46925877-46935876 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312558 5265 Fabidae View MSA
124073485 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.022     Low  
cufflinks 0.246       High
cufflinks 0.018     Low  
cufflinks 0.009     Low Low
cufflinks 0.081        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.08        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain