Gene : Medtr1g103740 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR21596//PTHR21596:SF11 - RIBONUCLEASE P SUBUNIT P38 Description:  XS domain protein
Genomic Order:  5870 Name:  ? Medtr1g103740
Secondary Identifier:  ? PAC:31093170
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g103740 0.5kb upstream 0.5kb upstream 5299 true chr1: 46954272-46959570 Medicago truncatula
Medtr1g103740 0.5kb upstream 0.5kb upstream 500 false chr1: 46959071-46959570 Medicago truncatula
Medtr1g103740 0.5kb downstream 0.5kb downstream 5299 true chr1: 46953772-46959070 Medicago truncatula
Medtr1g103740 0.5kb downstream 0.5kb downstream 500 false chr1: 46953772-46954271 Medicago truncatula
Medtr1g103740 1.0kb upstream 1.0kb upstream 5799 true chr1: 46954272-46960070 Medicago truncatula
Medtr1g103740 1.0kb upstream 1.0kb upstream 1000 false chr1: 46959071-46960070 Medicago truncatula
Medtr1g103740 1.0kb downstream 1.0kb downstream 5799 true chr1: 46953272-46959070 Medicago truncatula
Medtr1g103740 1.0kb downstream 1.0kb downstream 1000 false chr1: 46953272-46954271 Medicago truncatula
Medtr1g103740 2.0kb upstream 2.0kb upstream 6799 true chr1: 46954272-46961070 Medicago truncatula
Medtr1g103740 2.0kb upstream 2.0kb upstream 2000 false chr1: 46959071-46961070 Medicago truncatula
Medtr1g103740 2.0kb downstream 2.0kb downstream 6799 true chr1: 46952272-46959070 Medicago truncatula
Medtr1g103740 2.0kb downstream 2.0kb downstream 2000 false chr1: 46952272-46954271 Medicago truncatula
Medtr1g103740 5.0kb upstream 5.0kb upstream 9799 true chr1: 46954272-46964070 Medicago truncatula
Medtr1g103740 5.0kb upstream 5.0kb upstream 5000 false chr1: 46959071-46964070 Medicago truncatula
Medtr1g103740 5.0kb downstream 5.0kb downstream 9799 true chr1: 46949272-46959070 Medicago truncatula
Medtr1g103740 5.0kb downstream 5.0kb downstream 5000 false chr1: 46949272-46954271 Medicago truncatula
Medtr1g103740 10.0kb upstream 10.0kb upstream 14799 true chr1: 46954272-46969070 Medicago truncatula
Medtr1g103740 10.0kb upstream 10.0kb upstream 10000 false chr1: 46959071-46969070 Medicago truncatula
Medtr1g103740 10.0kb downstream 10.0kb downstream 14799 true chr1: 46944272-46959070 Medicago truncatula
Medtr1g103740 10.0kb downstream 10.0kb downstream 10000 false chr1: 46944272-46954271 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303515 5265 Fabidae View MSA
124063905 5270 Rosid View MSA
123737259 5271 Pentapetalae View MSA
122789928 5272 Eudicot View MSA
122042202 5273 Angiosperm View MSA
121309933 5274 Embryophyte View MSA
123347562 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.166        
cufflinks 1.626        
cufflinks 1.89        
cufflinks 3.827       High
cufflinks 1.606        
cufflinks 1.653        
cufflinks 3.196        
cufflinks 1.519       Low
cufflinks 4.217       High

0 Strain