Gene : Medtr1g104650 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11771:SF53 - LINOLEATE 9S-LIPOXYGENASE 5, CHLOROPLASTIC Description:  linoleate 9S-lipoxygenase-like protein
Genomic Order:  5892 Name:  ? Medtr1g104650
Secondary Identifier:  ? PAC:31097132
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g104650 0.5kb upstream 0.5kb upstream 6989 true chr1: 47126095-47133083 Medicago truncatula
Medtr1g104650 0.5kb upstream 0.5kb upstream 500 false chr1: 47132584-47133083 Medicago truncatula
Medtr1g104650 0.5kb downstream 0.5kb downstream 6989 true chr1: 47125595-47132583 Medicago truncatula
Medtr1g104650 0.5kb downstream 0.5kb downstream 500 false chr1: 47125595-47126094 Medicago truncatula
Medtr1g104650 1.0kb upstream 1.0kb upstream 7489 true chr1: 47126095-47133583 Medicago truncatula
Medtr1g104650 1.0kb upstream 1.0kb upstream 1000 false chr1: 47132584-47133583 Medicago truncatula
Medtr1g104650 1.0kb downstream 1.0kb downstream 7489 true chr1: 47125095-47132583 Medicago truncatula
Medtr1g104650 1.0kb downstream 1.0kb downstream 1000 false chr1: 47125095-47126094 Medicago truncatula
Medtr1g104650 2.0kb upstream 2.0kb upstream 8489 true chr1: 47126095-47134583 Medicago truncatula
Medtr1g104650 2.0kb upstream 2.0kb upstream 2000 false chr1: 47132584-47134583 Medicago truncatula
Medtr1g104650 2.0kb downstream 2.0kb downstream 8489 true chr1: 47124095-47132583 Medicago truncatula
Medtr1g104650 2.0kb downstream 2.0kb downstream 2000 false chr1: 47124095-47126094 Medicago truncatula
Medtr1g104650 5.0kb upstream 5.0kb upstream 11489 true chr1: 47126095-47137583 Medicago truncatula
Medtr1g104650 5.0kb upstream 5.0kb upstream 5000 false chr1: 47132584-47137583 Medicago truncatula
Medtr1g104650 5.0kb downstream 5.0kb downstream 11489 true chr1: 47121095-47132583 Medicago truncatula
Medtr1g104650 5.0kb downstream 5.0kb downstream 5000 false chr1: 47121095-47126094 Medicago truncatula
Medtr1g104650 10.0kb upstream 10.0kb upstream 16489 true chr1: 47126095-47142583 Medicago truncatula
Medtr1g104650 10.0kb upstream 10.0kb upstream 10000 false chr1: 47132584-47142583 Medicago truncatula
Medtr1g104650 10.0kb downstream 10.0kb downstream 16489 true chr1: 47116095-47132583 Medicago truncatula
Medtr1g104650 10.0kb downstream 10.0kb downstream 10000 false chr1: 47116095-47126094 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
122302185 5265 Fabidae View MSA
124071703 5270 Rosid View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.187       Low
cufflinks 3.415        
cufflinks 2.249        
cufflinks 0.475        
cufflinks 4.251        
cufflinks 0.187       Low
cufflinks 1.433        
cufflinks 2.294        
cufflinks 4.77       High

0 Strain