Gene : Medtr1g104710 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Description:  TIME FOR coffee-like protein, putative
Genomic Order:  5896 Name:  ? Medtr1g104710
Secondary Identifier:  ? PAC:31099683
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g104710 0.5kb upstream 0.5kb upstream 7545 true chr1: 47167865-47175409 Medicago truncatula
Medtr1g104710 0.5kb upstream 0.5kb upstream 500 false chr1: 47174910-47175409 Medicago truncatula
Medtr1g104710 0.5kb downstream 0.5kb downstream 7545 true chr1: 47167365-47174909 Medicago truncatula
Medtr1g104710 0.5kb downstream 0.5kb downstream 500 false chr1: 47167365-47167864 Medicago truncatula
Medtr1g104710 1.0kb upstream 1.0kb upstream 8045 true chr1: 47167865-47175909 Medicago truncatula
Medtr1g104710 1.0kb upstream 1.0kb upstream 1000 false chr1: 47174910-47175909 Medicago truncatula
Medtr1g104710 1.0kb downstream 1.0kb downstream 8045 true chr1: 47166865-47174909 Medicago truncatula
Medtr1g104710 1.0kb downstream 1.0kb downstream 1000 false chr1: 47166865-47167864 Medicago truncatula
Medtr1g104710 2.0kb upstream 2.0kb upstream 9045 true chr1: 47167865-47176909 Medicago truncatula
Medtr1g104710 2.0kb upstream 2.0kb upstream 2000 false chr1: 47174910-47176909 Medicago truncatula
Medtr1g104710 2.0kb downstream 2.0kb downstream 9045 true chr1: 47165865-47174909 Medicago truncatula
Medtr1g104710 2.0kb downstream 2.0kb downstream 2000 false chr1: 47165865-47167864 Medicago truncatula
Medtr1g104710 5.0kb upstream 5.0kb upstream 12045 true chr1: 47167865-47179909 Medicago truncatula
Medtr1g104710 5.0kb upstream 5.0kb upstream 5000 false chr1: 47174910-47179909 Medicago truncatula
Medtr1g104710 5.0kb downstream 5.0kb downstream 12045 true chr1: 47162865-47174909 Medicago truncatula
Medtr1g104710 5.0kb downstream 5.0kb downstream 5000 false chr1: 47162865-47167864 Medicago truncatula
Medtr1g104710 10.0kb upstream 10.0kb upstream 17045 true chr1: 47167865-47184909 Medicago truncatula
Medtr1g104710 10.0kb upstream 10.0kb upstream 10000 false chr1: 47174910-47184909 Medicago truncatula
Medtr1g104710 10.0kb downstream 10.0kb downstream 17045 true chr1: 47157865-47174909 Medicago truncatula
Medtr1g104710 10.0kb downstream 10.0kb downstream 10000 false chr1: 47157865-47167864 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299656 5265 Fabidae View MSA
124068885 5270 Rosid View MSA
123740436 5271 Pentapetalae View MSA
122788537 5272 Eudicot View MSA
122049796 5273 Angiosperm View MSA
121350697 5274 Embryophyte View MSA
123381850 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.052     High  
cufflinks 46.76     High  
cufflinks 49.335     High  
cufflinks 11.554     High Low
cufflinks 50.299     High  
cufflinks 9.631       Low
cufflinks 21.701     High  
cufflinks 41.143     High  
cufflinks 16.217     High  

0 Strain