Gene : Medtr1g105495 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31062:SF1 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED Description:  xyloglucan endotransglucosylase/hydrolase family protein
Genomic Order:  5947 Name:  ? Medtr1g105495
Secondary Identifier:  ? PAC:31099542
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g105495 0.5kb upstream 0.5kb upstream 2804 true chr1: 47493688-47496491 Medicago truncatula
Medtr1g105495 0.5kb upstream 0.5kb upstream 500 false chr1: 47493688-47494187 Medicago truncatula
Medtr1g105495 0.5kb downstream 0.5kb downstream 2804 true chr1: 47494188-47496991 Medicago truncatula
Medtr1g105495 0.5kb downstream 0.5kb downstream 500 false chr1: 47496492-47496991 Medicago truncatula
Medtr1g105495 1.0kb upstream 1.0kb upstream 3304 true chr1: 47493188-47496491 Medicago truncatula
Medtr1g105495 1.0kb upstream 1.0kb upstream 1000 false chr1: 47493188-47494187 Medicago truncatula
Medtr1g105495 1.0kb downstream 1.0kb downstream 3304 true chr1: 47494188-47497491 Medicago truncatula
Medtr1g105495 1.0kb downstream 1.0kb downstream 1000 false chr1: 47496492-47497491 Medicago truncatula
Medtr1g105495 2.0kb upstream 2.0kb upstream 4304 true chr1: 47492188-47496491 Medicago truncatula
Medtr1g105495 2.0kb upstream 2.0kb upstream 2000 false chr1: 47492188-47494187 Medicago truncatula
Medtr1g105495 2.0kb downstream 2.0kb downstream 4304 true chr1: 47494188-47498491 Medicago truncatula
Medtr1g105495 2.0kb downstream 2.0kb downstream 2000 false chr1: 47496492-47498491 Medicago truncatula
Medtr1g105495 5.0kb upstream 5.0kb upstream 7304 true chr1: 47489188-47496491 Medicago truncatula
Medtr1g105495 5.0kb upstream 5.0kb upstream 5000 false chr1: 47489188-47494187 Medicago truncatula
Medtr1g105495 5.0kb downstream 5.0kb downstream 7304 true chr1: 47494188-47501491 Medicago truncatula
Medtr1g105495 5.0kb downstream 5.0kb downstream 5000 false chr1: 47496492-47501491 Medicago truncatula
Medtr1g105495 10.0kb upstream 10.0kb upstream 12304 true chr1: 47484188-47496491 Medicago truncatula
Medtr1g105495 10.0kb upstream 10.0kb upstream 10000 false chr1: 47484188-47494187 Medicago truncatula
Medtr1g105495 10.0kb downstream 10.0kb downstream 12304 true chr1: 47494188-47506491 Medicago truncatula
Medtr1g105495 10.0kb downstream 10.0kb downstream 10000 false chr1: 47496492-47506491 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301252 5265 Fabidae View MSA
124062437 5270 Rosid View MSA
123740499 5271 Pentapetalae View MSA
122785607 5272 Eudicot View MSA
122047013 5273 Angiosperm View MSA
121352157 5274 Embryophyte View MSA
123382575 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.953       Low
cufflinks 8.257        
cufflinks 14.05     High High
cufflinks 2.201        
cufflinks 17.777     High High
cufflinks 1.562       Low
cufflinks 3.533        
cufflinks 8.632        
cufflinks 4.402        

0 Strain