Gene : Medtr1g105065 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12150:SF13 - DUF171 FAMILY PROTEIN Description:  RNA methyltransferase, putative
Genomic Order:  5925 Name:  ? Medtr1g105065
Secondary Identifier:  ? PAC:31092628
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g105065 0.5kb upstream 0.5kb upstream 6673 true chr1: 47357568-47364240 Medicago truncatula
Medtr1g105065 0.5kb upstream 0.5kb upstream 500 false chr1: 47363741-47364240 Medicago truncatula
Medtr1g105065 0.5kb downstream 0.5kb downstream 6673 true chr1: 47357068-47363740 Medicago truncatula
Medtr1g105065 0.5kb downstream 0.5kb downstream 500 false chr1: 47357068-47357567 Medicago truncatula
Medtr1g105065 1.0kb upstream 1.0kb upstream 7173 true chr1: 47357568-47364740 Medicago truncatula
Medtr1g105065 1.0kb upstream 1.0kb upstream 1000 false chr1: 47363741-47364740 Medicago truncatula
Medtr1g105065 1.0kb downstream 1.0kb downstream 7173 true chr1: 47356568-47363740 Medicago truncatula
Medtr1g105065 1.0kb downstream 1.0kb downstream 1000 false chr1: 47356568-47357567 Medicago truncatula
Medtr1g105065 2.0kb upstream 2.0kb upstream 8173 true chr1: 47357568-47365740 Medicago truncatula
Medtr1g105065 2.0kb upstream 2.0kb upstream 2000 false chr1: 47363741-47365740 Medicago truncatula
Medtr1g105065 2.0kb downstream 2.0kb downstream 8173 true chr1: 47355568-47363740 Medicago truncatula
Medtr1g105065 2.0kb downstream 2.0kb downstream 2000 false chr1: 47355568-47357567 Medicago truncatula
Medtr1g105065 5.0kb upstream 5.0kb upstream 11173 true chr1: 47357568-47368740 Medicago truncatula
Medtr1g105065 5.0kb upstream 5.0kb upstream 5000 false chr1: 47363741-47368740 Medicago truncatula
Medtr1g105065 5.0kb downstream 5.0kb downstream 11173 true chr1: 47352568-47363740 Medicago truncatula
Medtr1g105065 5.0kb downstream 5.0kb downstream 5000 false chr1: 47352568-47357567 Medicago truncatula
Medtr1g105065 10.0kb upstream 10.0kb upstream 16173 true chr1: 47357568-47373740 Medicago truncatula
Medtr1g105065 10.0kb upstream 10.0kb upstream 10000 false chr1: 47363741-47373740 Medicago truncatula
Medtr1g105065 10.0kb downstream 10.0kb downstream 16173 true chr1: 47347568-47363740 Medicago truncatula
Medtr1g105065 10.0kb downstream 10.0kb downstream 10000 false chr1: 47347568-47357567 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305260 5265 Fabidae View MSA
124066028 5270 Rosid View MSA
123736407 5271 Pentapetalae View MSA
122788915 5272 Eudicot View MSA
122044341 5273 Angiosperm View MSA
121344963 5274 Embryophyte View MSA
123425099 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.092        
cufflinks 1.13        
cufflinks 1.198        
cufflinks 0.708        
cufflinks 1.804       High
cufflinks 0.353       Low
cufflinks 1.172        
cufflinks 1.096        
cufflinks 1.246        

0 Strain