Gene : Medtr1g096810 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.7.7.72 - CCA tRNA nucleotidyltransferase / tRNA-nucleotidyltransferase Description:  tRNA nucleotidyltransferase
Genomic Order:  5397 Name:  ? Medtr1g096810
Secondary Identifier:  ? PAC:31096520
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g096810 0.5kb upstream 0.5kb upstream 6952 true chr1: 43613134-43620085 Medicago truncatula
Medtr1g096810 0.5kb upstream 0.5kb upstream 500 false chr1: 43619586-43620085 Medicago truncatula
Medtr1g096810 0.5kb downstream 0.5kb downstream 6952 true chr1: 43612634-43619585 Medicago truncatula
Medtr1g096810 0.5kb downstream 0.5kb downstream 500 false chr1: 43612634-43613133 Medicago truncatula
Medtr1g096810 1.0kb upstream 1.0kb upstream 7452 true chr1: 43613134-43620585 Medicago truncatula
Medtr1g096810 1.0kb upstream 1.0kb upstream 1000 false chr1: 43619586-43620585 Medicago truncatula
Medtr1g096810 1.0kb downstream 1.0kb downstream 7452 true chr1: 43612134-43619585 Medicago truncatula
Medtr1g096810 1.0kb downstream 1.0kb downstream 1000 false chr1: 43612134-43613133 Medicago truncatula
Medtr1g096810 2.0kb upstream 2.0kb upstream 8452 true chr1: 43613134-43621585 Medicago truncatula
Medtr1g096810 2.0kb upstream 2.0kb upstream 2000 false chr1: 43619586-43621585 Medicago truncatula
Medtr1g096810 2.0kb downstream 2.0kb downstream 8452 true chr1: 43611134-43619585 Medicago truncatula
Medtr1g096810 2.0kb downstream 2.0kb downstream 2000 false chr1: 43611134-43613133 Medicago truncatula
Medtr1g096810 5.0kb upstream 5.0kb upstream 11452 true chr1: 43613134-43624585 Medicago truncatula
Medtr1g096810 5.0kb upstream 5.0kb upstream 5000 false chr1: 43619586-43624585 Medicago truncatula
Medtr1g096810 5.0kb downstream 5.0kb downstream 11452 true chr1: 43608134-43619585 Medicago truncatula
Medtr1g096810 5.0kb downstream 5.0kb downstream 5000 false chr1: 43608134-43613133 Medicago truncatula
Medtr1g096810 10.0kb upstream 10.0kb upstream 16452 true chr1: 43613134-43629585 Medicago truncatula
Medtr1g096810 10.0kb upstream 10.0kb upstream 10000 false chr1: 43619586-43629585 Medicago truncatula
Medtr1g096810 10.0kb downstream 10.0kb downstream 16452 true chr1: 43603134-43619585 Medicago truncatula
Medtr1g096810 10.0kb downstream 10.0kb downstream 10000 false chr1: 43603134-43613133 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122256445 5265 Fabidae Singleton cluster - no MSA
124041845 5270 Rosid View MSA
123751527 5271 Pentapetalae View MSA
122793185 5272 Eudicot View MSA
122043482 5273 Angiosperm View MSA
121344625 5274 Embryophyte View MSA
123428724 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.246        
cufflinks 0.68        
cufflinks 0.925        
cufflinks 0.107       Low
cufflinks 1.089       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.119        
cufflinks 0.84        
cufflinks 0.075     Low Low

0 Strain