Gene : Medtr1g096450 M. truncatula Mt4.0v1
Defline:  (1 of 3) KOG3140 - Predicted membrane protein Description:  SNARE associated family protein
Genomic Order:  5382 Name:  ? Medtr1g096450
Secondary Identifier:  ? PAC:31096618
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g096450 0.5kb upstream 0.5kb upstream 4521 true chr1: 43443751-43448271 Medicago truncatula
Medtr1g096450 0.5kb upstream 0.5kb upstream 500 false chr1: 43443751-43444250 Medicago truncatula
Medtr1g096450 0.5kb downstream 0.5kb downstream 4521 true chr1: 43444251-43448771 Medicago truncatula
Medtr1g096450 0.5kb downstream 0.5kb downstream 500 false chr1: 43448272-43448771 Medicago truncatula
Medtr1g096450 1.0kb upstream 1.0kb upstream 5021 true chr1: 43443251-43448271 Medicago truncatula
Medtr1g096450 1.0kb upstream 1.0kb upstream 1000 false chr1: 43443251-43444250 Medicago truncatula
Medtr1g096450 1.0kb downstream 1.0kb downstream 5021 true chr1: 43444251-43449271 Medicago truncatula
Medtr1g096450 1.0kb downstream 1.0kb downstream 1000 false chr1: 43448272-43449271 Medicago truncatula
Medtr1g096450 2.0kb upstream 2.0kb upstream 6021 true chr1: 43442251-43448271 Medicago truncatula
Medtr1g096450 2.0kb upstream 2.0kb upstream 2000 false chr1: 43442251-43444250 Medicago truncatula
Medtr1g096450 2.0kb downstream 2.0kb downstream 6021 true chr1: 43444251-43450271 Medicago truncatula
Medtr1g096450 2.0kb downstream 2.0kb downstream 2000 false chr1: 43448272-43450271 Medicago truncatula
Medtr1g096450 5.0kb upstream 5.0kb upstream 9021 true chr1: 43439251-43448271 Medicago truncatula
Medtr1g096450 5.0kb upstream 5.0kb upstream 5000 false chr1: 43439251-43444250 Medicago truncatula
Medtr1g096450 5.0kb downstream 5.0kb downstream 9021 true chr1: 43444251-43453271 Medicago truncatula
Medtr1g096450 5.0kb downstream 5.0kb downstream 5000 false chr1: 43448272-43453271 Medicago truncatula
Medtr1g096450 10.0kb upstream 10.0kb upstream 14021 true chr1: 43434251-43448271 Medicago truncatula
Medtr1g096450 10.0kb upstream 10.0kb upstream 10000 false chr1: 43434251-43444250 Medicago truncatula
Medtr1g096450 10.0kb downstream 10.0kb downstream 14021 true chr1: 43444251-43458271 Medicago truncatula
Medtr1g096450 10.0kb downstream 10.0kb downstream 10000 false chr1: 43448272-43458271 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307569 5265 Fabidae View MSA
124063946 5270 Rosid View MSA
123748602 5271 Pentapetalae View MSA
122793245 5272 Eudicot View MSA
122048456 5273 Angiosperm View MSA
121348714 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.011       Low
cufflinks 2.077        
cufflinks 1.727        
cufflinks 2.414        
cufflinks 3.187       High
cufflinks 1.619        
cufflinks 1.424        
cufflinks 1.497        
cufflinks 1.611        

0 Strain