Gene : Medtr1g096410 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15606:SF3 - GPALPP MOTIFS-CONTAINING PROTEIN 1 Description:  DnaJ heat shock amine-terminal domain protein
Genomic Order:  5380 Name:  ? Medtr1g096410
Secondary Identifier:  ? PAC:31094445
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g096410 0.5kb upstream 0.5kb upstream 8974 true chr1: 43416113-43425086 Medicago truncatula
Medtr1g096410 0.5kb upstream 0.5kb upstream 500 false chr1: 43416113-43416612 Medicago truncatula
Medtr1g096410 0.5kb downstream 0.5kb downstream 8974 true chr1: 43416613-43425586 Medicago truncatula
Medtr1g096410 0.5kb downstream 0.5kb downstream 500 false chr1: 43425087-43425586 Medicago truncatula
Medtr1g096410 1.0kb upstream 1.0kb upstream 9474 true chr1: 43415613-43425086 Medicago truncatula
Medtr1g096410 1.0kb upstream 1.0kb upstream 1000 false chr1: 43415613-43416612 Medicago truncatula
Medtr1g096410 1.0kb downstream 1.0kb downstream 9474 true chr1: 43416613-43426086 Medicago truncatula
Medtr1g096410 1.0kb downstream 1.0kb downstream 1000 false chr1: 43425087-43426086 Medicago truncatula
Medtr1g096410 2.0kb upstream 2.0kb upstream 10474 true chr1: 43414613-43425086 Medicago truncatula
Medtr1g096410 2.0kb upstream 2.0kb upstream 2000 false chr1: 43414613-43416612 Medicago truncatula
Medtr1g096410 2.0kb downstream 2.0kb downstream 10474 true chr1: 43416613-43427086 Medicago truncatula
Medtr1g096410 2.0kb downstream 2.0kb downstream 2000 false chr1: 43425087-43427086 Medicago truncatula
Medtr1g096410 5.0kb upstream 5.0kb upstream 13474 true chr1: 43411613-43425086 Medicago truncatula
Medtr1g096410 5.0kb upstream 5.0kb upstream 5000 false chr1: 43411613-43416612 Medicago truncatula
Medtr1g096410 5.0kb downstream 5.0kb downstream 13474 true chr1: 43416613-43430086 Medicago truncatula
Medtr1g096410 5.0kb downstream 5.0kb downstream 5000 false chr1: 43425087-43430086 Medicago truncatula
Medtr1g096410 10.0kb upstream 10.0kb upstream 18474 true chr1: 43406613-43425086 Medicago truncatula
Medtr1g096410 10.0kb upstream 10.0kb upstream 10000 false chr1: 43406613-43416612 Medicago truncatula
Medtr1g096410 10.0kb downstream 10.0kb downstream 18474 true chr1: 43416613-43435086 Medicago truncatula
Medtr1g096410 10.0kb downstream 10.0kb downstream 10000 false chr1: 43425087-43435086 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027715 5273 Angiosperm View MSA
122306036 5265 Fabidae View MSA
124066706 5270 Rosid View MSA
123745107 5271 Pentapetalae View MSA
122785830 5272 Eudicot View MSA
121344293 5274 Embryophyte View MSA
123426211 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.124       High
cufflinks 0.868        
cufflinks 1.028        
cufflinks 0.384       Low
cufflinks 0.927        
cufflinks 0.359       Low
cufflinks 0.909        
cufflinks 0.88        
cufflinks 0.603        

0 Strain