Gene : Medtr1g096490 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR24349:SF166 - CALCIUM-DEPENDENT PROTEIN KINASE 11-RELATED Description:  calmodulin-domain kinase CDPK protein
Genomic Order:  5384 Name:  ? Medtr1g096490
Secondary Identifier:  ? PAC:31095859
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g096490 0.5kb upstream 0.5kb upstream 3900 true chr1: 43462266-43466165 Medicago truncatula
Medtr1g096490 0.5kb upstream 0.5kb upstream 500 false chr1: 43465666-43466165 Medicago truncatula
Medtr1g096490 0.5kb downstream 0.5kb downstream 3900 true chr1: 43461766-43465665 Medicago truncatula
Medtr1g096490 0.5kb downstream 0.5kb downstream 500 false chr1: 43461766-43462265 Medicago truncatula
Medtr1g096490 1.0kb upstream 1.0kb upstream 4400 true chr1: 43462266-43466665 Medicago truncatula
Medtr1g096490 1.0kb upstream 1.0kb upstream 1000 false chr1: 43465666-43466665 Medicago truncatula
Medtr1g096490 1.0kb downstream 1.0kb downstream 4400 true chr1: 43461266-43465665 Medicago truncatula
Medtr1g096490 1.0kb downstream 1.0kb downstream 1000 false chr1: 43461266-43462265 Medicago truncatula
Medtr1g096490 2.0kb upstream 2.0kb upstream 5400 true chr1: 43462266-43467665 Medicago truncatula
Medtr1g096490 2.0kb upstream 2.0kb upstream 2000 false chr1: 43465666-43467665 Medicago truncatula
Medtr1g096490 2.0kb downstream 2.0kb downstream 5400 true chr1: 43460266-43465665 Medicago truncatula
Medtr1g096490 2.0kb downstream 2.0kb downstream 2000 false chr1: 43460266-43462265 Medicago truncatula
Medtr1g096490 5.0kb upstream 5.0kb upstream 8400 true chr1: 43462266-43470665 Medicago truncatula
Medtr1g096490 5.0kb upstream 5.0kb upstream 5000 false chr1: 43465666-43470665 Medicago truncatula
Medtr1g096490 5.0kb downstream 5.0kb downstream 8400 true chr1: 43457266-43465665 Medicago truncatula
Medtr1g096490 5.0kb downstream 5.0kb downstream 5000 false chr1: 43457266-43462265 Medicago truncatula
Medtr1g096490 10.0kb upstream 10.0kb upstream 13400 true chr1: 43462266-43475665 Medicago truncatula
Medtr1g096490 10.0kb upstream 10.0kb upstream 10000 false chr1: 43465666-43475665 Medicago truncatula
Medtr1g096490 10.0kb downstream 10.0kb downstream 13400 true chr1: 43452266-43465665 Medicago truncatula
Medtr1g096490 10.0kb downstream 10.0kb downstream 10000 false chr1: 43452266-43462265 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300300 5265 Fabidae View MSA
124069708 5270 Rosid View MSA
123741053 5271 Pentapetalae View MSA
122787584 5272 Eudicot View MSA
122047311 5273 Angiosperm View MSA
121310726 5274 Embryophyte View MSA
123427978 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.024     Low Low
cufflinks 0.175        
cufflinks 0.208        
cufflinks 0.096        
cufflinks 0.815       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low Low
cufflinks 0.24        
cufflinks 0.232        

0 Strain