Gene : Medtr1g096230 M. truncatula Mt4.0v1
Defline:  (1 of 73) PF13414 - TPR repeat (TPR_11) Description:  TPR protein
Genomic Order:  5368 Name:  ? Medtr1g096230
Secondary Identifier:  ? PAC:31100188
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g096230 0.5kb upstream 0.5kb upstream 4247 true chr1: 43321503-43325749 Medicago truncatula
Medtr1g096230 0.5kb upstream 0.5kb upstream 500 false chr1: 43325250-43325749 Medicago truncatula
Medtr1g096230 0.5kb downstream 0.5kb downstream 4247 true chr1: 43321003-43325249 Medicago truncatula
Medtr1g096230 0.5kb downstream 0.5kb downstream 500 false chr1: 43321003-43321502 Medicago truncatula
Medtr1g096230 1.0kb upstream 1.0kb upstream 4747 true chr1: 43321503-43326249 Medicago truncatula
Medtr1g096230 1.0kb upstream 1.0kb upstream 1000 false chr1: 43325250-43326249 Medicago truncatula
Medtr1g096230 1.0kb downstream 1.0kb downstream 4747 true chr1: 43320503-43325249 Medicago truncatula
Medtr1g096230 1.0kb downstream 1.0kb downstream 1000 false chr1: 43320503-43321502 Medicago truncatula
Medtr1g096230 2.0kb upstream 2.0kb upstream 5747 true chr1: 43321503-43327249 Medicago truncatula
Medtr1g096230 2.0kb upstream 2.0kb upstream 2000 false chr1: 43325250-43327249 Medicago truncatula
Medtr1g096230 2.0kb downstream 2.0kb downstream 5747 true chr1: 43319503-43325249 Medicago truncatula
Medtr1g096230 2.0kb downstream 2.0kb downstream 2000 false chr1: 43319503-43321502 Medicago truncatula
Medtr1g096230 5.0kb upstream 5.0kb upstream 8747 true chr1: 43321503-43330249 Medicago truncatula
Medtr1g096230 5.0kb upstream 5.0kb upstream 5000 false chr1: 43325250-43330249 Medicago truncatula
Medtr1g096230 5.0kb downstream 5.0kb downstream 8747 true chr1: 43316503-43325249 Medicago truncatula
Medtr1g096230 5.0kb downstream 5.0kb downstream 5000 false chr1: 43316503-43321502 Medicago truncatula
Medtr1g096230 10.0kb upstream 10.0kb upstream 13747 true chr1: 43321503-43335249 Medicago truncatula
Medtr1g096230 10.0kb upstream 10.0kb upstream 10000 false chr1: 43325250-43335249 Medicago truncatula
Medtr1g096230 10.0kb downstream 10.0kb downstream 13747 true chr1: 43311503-43325249 Medicago truncatula
Medtr1g096230 10.0kb downstream 10.0kb downstream 10000 false chr1: 43311503-43321502 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304673 5265 Fabidae View MSA
124066408 5270 Rosid View MSA
123743550 5271 Pentapetalae View MSA
122794346 5272 Eudicot View MSA
122044737 5273 Angiosperm View MSA
121345033 5274 Embryophyte View MSA
123428414 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.734        
cufflinks 13.214     High  
cufflinks 11.959     High  
cufflinks 3.789        
cufflinks 16.834     High High
cufflinks 0.78       Low
cufflinks 2.491        
cufflinks 11.326     High  
cufflinks 1.945        

0 Strain