Gene : Medtr1g096030 M. truncatula Mt4.0v1
Defline:  (1 of 67) PF03514 - GRAS domain family (GRAS) Description:  GRAS family transcription factor
Genomic Order:  5365 Name:  ? Medtr1g096030
Secondary Identifier:  ? PAC:31099207
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g096030 0.5kb upstream 0.5kb upstream 1886 true chr1: 43289142-43291027 Medicago truncatula
Medtr1g096030 0.5kb upstream 0.5kb upstream 500 false chr1: 43289142-43289641 Medicago truncatula
Medtr1g096030 0.5kb downstream 0.5kb downstream 1886 true chr1: 43289642-43291527 Medicago truncatula
Medtr1g096030 0.5kb downstream 0.5kb downstream 500 false chr1: 43291028-43291527 Medicago truncatula
Medtr1g096030 1.0kb upstream 1.0kb upstream 2386 true chr1: 43288642-43291027 Medicago truncatula
Medtr1g096030 1.0kb upstream 1.0kb upstream 1000 false chr1: 43288642-43289641 Medicago truncatula
Medtr1g096030 1.0kb downstream 1.0kb downstream 2386 true chr1: 43289642-43292027 Medicago truncatula
Medtr1g096030 1.0kb downstream 1.0kb downstream 1000 false chr1: 43291028-43292027 Medicago truncatula
Medtr1g096030 2.0kb upstream 2.0kb upstream 3386 true chr1: 43287642-43291027 Medicago truncatula
Medtr1g096030 2.0kb upstream 2.0kb upstream 2000 false chr1: 43287642-43289641 Medicago truncatula
Medtr1g096030 2.0kb downstream 2.0kb downstream 3386 true chr1: 43289642-43293027 Medicago truncatula
Medtr1g096030 2.0kb downstream 2.0kb downstream 2000 false chr1: 43291028-43293027 Medicago truncatula
Medtr1g096030 5.0kb upstream 5.0kb upstream 6386 true chr1: 43284642-43291027 Medicago truncatula
Medtr1g096030 5.0kb upstream 5.0kb upstream 5000 false chr1: 43284642-43289641 Medicago truncatula
Medtr1g096030 5.0kb downstream 5.0kb downstream 6386 true chr1: 43289642-43296027 Medicago truncatula
Medtr1g096030 5.0kb downstream 5.0kb downstream 5000 false chr1: 43291028-43296027 Medicago truncatula
Medtr1g096030 10.0kb upstream 10.0kb upstream 11386 true chr1: 43279642-43291027 Medicago truncatula
Medtr1g096030 10.0kb upstream 10.0kb upstream 10000 false chr1: 43279642-43289641 Medicago truncatula
Medtr1g096030 10.0kb downstream 10.0kb downstream 11386 true chr1: 43289642-43301027 Medicago truncatula
Medtr1g096030 10.0kb downstream 10.0kb downstream 10000 false chr1: 43291028-43301027 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303664 5265 Fabidae View MSA
124071598 5270 Rosid View MSA
123750317 5271 Pentapetalae View MSA
122794968 5272 Eudicot View MSA
122048642 5273 Angiosperm View MSA
121311053 5274 Embryophyte View MSA
123348407 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.017     Low Low
cufflinks 0.05     Low High
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.043     Low  
cufflinks 0.026     Low  

0 Strain