Gene : Medtr1g096000 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22593:SF8 - PARALLEL SPINDLE 1 PROTEIN Description:  PIN domain protein
Genomic Order:  5367 Name:  ? Medtr1g096000
Secondary Identifier:  ? PAC:31095437
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g096000 0.5kb upstream 0.5kb upstream 5334 true chr1: 43300342-43305675 Medicago truncatula
Medtr1g096000 0.5kb upstream 0.5kb upstream 500 false chr1: 43300342-43300841 Medicago truncatula
Medtr1g096000 0.5kb downstream 0.5kb downstream 5334 true chr1: 43300842-43306175 Medicago truncatula
Medtr1g096000 0.5kb downstream 0.5kb downstream 500 false chr1: 43305676-43306175 Medicago truncatula
Medtr1g096000 1.0kb upstream 1.0kb upstream 5834 true chr1: 43299842-43305675 Medicago truncatula
Medtr1g096000 1.0kb upstream 1.0kb upstream 1000 false chr1: 43299842-43300841 Medicago truncatula
Medtr1g096000 1.0kb downstream 1.0kb downstream 5834 true chr1: 43300842-43306675 Medicago truncatula
Medtr1g096000 1.0kb downstream 1.0kb downstream 1000 false chr1: 43305676-43306675 Medicago truncatula
Medtr1g096000 2.0kb upstream 2.0kb upstream 6834 true chr1: 43298842-43305675 Medicago truncatula
Medtr1g096000 2.0kb upstream 2.0kb upstream 2000 false chr1: 43298842-43300841 Medicago truncatula
Medtr1g096000 2.0kb downstream 2.0kb downstream 6834 true chr1: 43300842-43307675 Medicago truncatula
Medtr1g096000 2.0kb downstream 2.0kb downstream 2000 false chr1: 43305676-43307675 Medicago truncatula
Medtr1g096000 5.0kb upstream 5.0kb upstream 9834 true chr1: 43295842-43305675 Medicago truncatula
Medtr1g096000 5.0kb upstream 5.0kb upstream 5000 false chr1: 43295842-43300841 Medicago truncatula
Medtr1g096000 5.0kb downstream 5.0kb downstream 9834 true chr1: 43300842-43310675 Medicago truncatula
Medtr1g096000 5.0kb downstream 5.0kb downstream 5000 false chr1: 43305676-43310675 Medicago truncatula
Medtr1g096000 10.0kb upstream 10.0kb upstream 14834 true chr1: 43290842-43305675 Medicago truncatula
Medtr1g096000 10.0kb upstream 10.0kb upstream 10000 false chr1: 43290842-43300841 Medicago truncatula
Medtr1g096000 10.0kb downstream 10.0kb downstream 14834 true chr1: 43300842-43315675 Medicago truncatula
Medtr1g096000 10.0kb downstream 10.0kb downstream 10000 false chr1: 43305676-43315675 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312125 5265 Fabidae View MSA
124069806 5270 Rosid View MSA
123746877 5271 Pentapetalae View MSA
122794534 5272 Eudicot View MSA
122048794 5273 Angiosperm View MSA
121349514 5274 Embryophyte View MSA
123381341 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.341        
cufflinks 0.188        
cufflinks 0.263        
cufflinks 0.067     Low Low
cufflinks 0.277        
cufflinks 0.18        
cufflinks 0.31        
cufflinks 0.189        
cufflinks 0.277        

0 Strain