Gene : Medtr1g098370 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG4442 - Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis Description:  histone-lysine N-methyltransferase ASHH1-like protein
Genomic Order:  5487 Name:  ? Medtr1g098370
Secondary Identifier:  ? PAC:31097351
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g098370 0.5kb upstream 0.5kb upstream 4317 true chr1: 44280795-44285111 Medicago truncatula
Medtr1g098370 0.5kb upstream 0.5kb upstream 500 false chr1: 44284612-44285111 Medicago truncatula
Medtr1g098370 0.5kb downstream 0.5kb downstream 4317 true chr1: 44280295-44284611 Medicago truncatula
Medtr1g098370 0.5kb downstream 0.5kb downstream 500 false chr1: 44280295-44280794 Medicago truncatula
Medtr1g098370 1.0kb upstream 1.0kb upstream 4817 true chr1: 44280795-44285611 Medicago truncatula
Medtr1g098370 1.0kb upstream 1.0kb upstream 1000 false chr1: 44284612-44285611 Medicago truncatula
Medtr1g098370 1.0kb downstream 1.0kb downstream 4817 true chr1: 44279795-44284611 Medicago truncatula
Medtr1g098370 1.0kb downstream 1.0kb downstream 1000 false chr1: 44279795-44280794 Medicago truncatula
Medtr1g098370 2.0kb upstream 2.0kb upstream 5817 true chr1: 44280795-44286611 Medicago truncatula
Medtr1g098370 2.0kb upstream 2.0kb upstream 2000 false chr1: 44284612-44286611 Medicago truncatula
Medtr1g098370 2.0kb downstream 2.0kb downstream 5817 true chr1: 44278795-44284611 Medicago truncatula
Medtr1g098370 2.0kb downstream 2.0kb downstream 2000 false chr1: 44278795-44280794 Medicago truncatula
Medtr1g098370 5.0kb upstream 5.0kb upstream 8817 true chr1: 44280795-44289611 Medicago truncatula
Medtr1g098370 5.0kb upstream 5.0kb upstream 5000 false chr1: 44284612-44289611 Medicago truncatula
Medtr1g098370 5.0kb downstream 5.0kb downstream 8817 true chr1: 44275795-44284611 Medicago truncatula
Medtr1g098370 5.0kb downstream 5.0kb downstream 5000 false chr1: 44275795-44280794 Medicago truncatula
Medtr1g098370 10.0kb upstream 10.0kb upstream 13817 true chr1: 44280795-44294611 Medicago truncatula
Medtr1g098370 10.0kb upstream 10.0kb upstream 10000 false chr1: 44284612-44294611 Medicago truncatula
Medtr1g098370 10.0kb downstream 10.0kb downstream 13817 true chr1: 44270795-44284611 Medicago truncatula
Medtr1g098370 10.0kb downstream 10.0kb downstream 10000 false chr1: 44270795-44280794 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297403 5265 Fabidae View MSA
124065473 5270 Rosid View MSA
123751966 5271 Pentapetalae View MSA
122790455 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.702        
cufflinks 0.721        
cufflinks 0.968       High
cufflinks 0.635       Low
cufflinks 0.918       High
cufflinks 0.75        
cufflinks 0.621       Low
cufflinks 0.756        
cufflinks 0.861        

0 Strain