Gene : Medtr1g097840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR19139:SF102 - AQUAPORIN NIP5-1-RELATED Description:  major intrinsic protein (MIP) family transporter
Genomic Order:  5460 Name:  ? Medtr1g097840
Secondary Identifier:  ? PAC:31096606
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g097840 0.5kb upstream 0.5kb upstream 5851 true chr1: 44096326-44102176 Medicago truncatula
Medtr1g097840 0.5kb upstream 0.5kb upstream 500 false chr1: 44096326-44096825 Medicago truncatula
Medtr1g097840 0.5kb downstream 0.5kb downstream 5851 true chr1: 44096826-44102676 Medicago truncatula
Medtr1g097840 0.5kb downstream 0.5kb downstream 500 false chr1: 44102177-44102676 Medicago truncatula
Medtr1g097840 1.0kb upstream 1.0kb upstream 6351 true chr1: 44095826-44102176 Medicago truncatula
Medtr1g097840 1.0kb upstream 1.0kb upstream 1000 false chr1: 44095826-44096825 Medicago truncatula
Medtr1g097840 1.0kb downstream 1.0kb downstream 6351 true chr1: 44096826-44103176 Medicago truncatula
Medtr1g097840 1.0kb downstream 1.0kb downstream 1000 false chr1: 44102177-44103176 Medicago truncatula
Medtr1g097840 2.0kb upstream 2.0kb upstream 7351 true chr1: 44094826-44102176 Medicago truncatula
Medtr1g097840 2.0kb upstream 2.0kb upstream 2000 false chr1: 44094826-44096825 Medicago truncatula
Medtr1g097840 2.0kb downstream 2.0kb downstream 7351 true chr1: 44096826-44104176 Medicago truncatula
Medtr1g097840 2.0kb downstream 2.0kb downstream 2000 false chr1: 44102177-44104176 Medicago truncatula
Medtr1g097840 5.0kb upstream 5.0kb upstream 10351 true chr1: 44091826-44102176 Medicago truncatula
Medtr1g097840 5.0kb upstream 5.0kb upstream 5000 false chr1: 44091826-44096825 Medicago truncatula
Medtr1g097840 5.0kb downstream 5.0kb downstream 10351 true chr1: 44096826-44107176 Medicago truncatula
Medtr1g097840 5.0kb downstream 5.0kb downstream 5000 false chr1: 44102177-44107176 Medicago truncatula
Medtr1g097840 10.0kb upstream 10.0kb upstream 15351 true chr1: 44086826-44102176 Medicago truncatula
Medtr1g097840 10.0kb upstream 10.0kb upstream 10000 false chr1: 44086826-44096825 Medicago truncatula
Medtr1g097840 10.0kb downstream 10.0kb downstream 15351 true chr1: 44096826-44112176 Medicago truncatula
Medtr1g097840 10.0kb downstream 10.0kb downstream 10000 false chr1: 44102177-44112176 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303541 5265 Fabidae View MSA
124067357 5270 Rosid View MSA
123747786 5271 Pentapetalae View MSA
122789550 5272 Eudicot View MSA
122042454 5273 Angiosperm View MSA
121349244 5274 Embryophyte View MSA
123427856 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.58        
cufflinks 0.011     Low Low
cufflinks 0.03     Low  
cufflinks 6.174       High
cufflinks 0.024     Low  
cufflinks 8.788       High
cufflinks 4.055        
cufflinks 0.017     Low Low
cufflinks 2.237        

0 Strain