Gene : Medtr1g099000 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF01926//PF03144//PF11987 - 50S ribosome-binding GTPase (MMR_HSR1) // Elongation factor Tu domain 2 (GTP_EFTU_D2) // Translation-initiation factor 2 (IF-2) Description:  translation initiation factor
Genomic Order:  5531 Name:  ? Medtr1g099000
Secondary Identifier:  ? PAC:31100432
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g099000 0.5kb upstream 0.5kb upstream 8954 true chr1: 44622789-44631742 Medicago truncatula
Medtr1g099000 0.5kb upstream 0.5kb upstream 500 false chr1: 44622789-44623288 Medicago truncatula
Medtr1g099000 0.5kb downstream 0.5kb downstream 8954 true chr1: 44623289-44632242 Medicago truncatula
Medtr1g099000 0.5kb downstream 0.5kb downstream 500 false chr1: 44631743-44632242 Medicago truncatula
Medtr1g099000 1.0kb upstream 1.0kb upstream 9454 true chr1: 44622289-44631742 Medicago truncatula
Medtr1g099000 1.0kb upstream 1.0kb upstream 1000 false chr1: 44622289-44623288 Medicago truncatula
Medtr1g099000 1.0kb downstream 1.0kb downstream 9454 true chr1: 44623289-44632742 Medicago truncatula
Medtr1g099000 1.0kb downstream 1.0kb downstream 1000 false chr1: 44631743-44632742 Medicago truncatula
Medtr1g099000 2.0kb upstream 2.0kb upstream 10454 true chr1: 44621289-44631742 Medicago truncatula
Medtr1g099000 2.0kb upstream 2.0kb upstream 2000 false chr1: 44621289-44623288 Medicago truncatula
Medtr1g099000 2.0kb downstream 2.0kb downstream 10454 true chr1: 44623289-44633742 Medicago truncatula
Medtr1g099000 2.0kb downstream 2.0kb downstream 2000 false chr1: 44631743-44633742 Medicago truncatula
Medtr1g099000 5.0kb upstream 5.0kb upstream 13454 true chr1: 44618289-44631742 Medicago truncatula
Medtr1g099000 5.0kb upstream 5.0kb upstream 5000 false chr1: 44618289-44623288 Medicago truncatula
Medtr1g099000 5.0kb downstream 5.0kb downstream 13454 true chr1: 44623289-44636742 Medicago truncatula
Medtr1g099000 5.0kb downstream 5.0kb downstream 5000 false chr1: 44631743-44636742 Medicago truncatula
Medtr1g099000 10.0kb upstream 10.0kb upstream 18454 true chr1: 44613289-44631742 Medicago truncatula
Medtr1g099000 10.0kb upstream 10.0kb upstream 10000 false chr1: 44613289-44623288 Medicago truncatula
Medtr1g099000 10.0kb downstream 10.0kb downstream 18454 true chr1: 44623289-44641742 Medicago truncatula
Medtr1g099000 10.0kb downstream 10.0kb downstream 10000 false chr1: 44631743-44641742 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303559 5265 Fabidae View MSA
124062120 5270 Rosid View MSA
123737205 5271 Pentapetalae View MSA
122786059 5272 Eudicot View MSA
122051139 5273 Angiosperm View MSA
121347361 5274 Embryophyte View MSA
123428388 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.949     High High
cufflinks 20.292     High  
cufflinks 19.461     High  
cufflinks 8.713       Low
cufflinks 20.75     High  
cufflinks 7.28       Low
cufflinks 14.061     High  
cufflinks 17.003     High  
cufflinks 8.718       Low

0 Strain