Gene : Medtr1g099640 M. truncatula Mt4.0v1
Defline:  (1 of 17) PTHR22814:SF129 - COPPER TRANSPORT FAMILY PROTEIN-RELATED Description:  metal ion-binding protein, putative
Genomic Order:  5581 Name:  ? Medtr1g099640
Secondary Identifier:  ? PAC:31095942
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g099640 0.5kb upstream 0.5kb upstream 1902 true chr1: 45008712-45010613 Medicago truncatula
Medtr1g099640 0.5kb upstream 0.5kb upstream 500 false chr1: 45010114-45010613 Medicago truncatula
Medtr1g099640 0.5kb downstream 0.5kb downstream 1902 true chr1: 45008212-45010113 Medicago truncatula
Medtr1g099640 0.5kb downstream 0.5kb downstream 500 false chr1: 45008212-45008711 Medicago truncatula
Medtr1g099640 1.0kb upstream 1.0kb upstream 2402 true chr1: 45008712-45011113 Medicago truncatula
Medtr1g099640 1.0kb upstream 1.0kb upstream 1000 false chr1: 45010114-45011113 Medicago truncatula
Medtr1g099640 1.0kb downstream 1.0kb downstream 2402 true chr1: 45007712-45010113 Medicago truncatula
Medtr1g099640 1.0kb downstream 1.0kb downstream 1000 false chr1: 45007712-45008711 Medicago truncatula
Medtr1g099640 2.0kb upstream 2.0kb upstream 3402 true chr1: 45008712-45012113 Medicago truncatula
Medtr1g099640 2.0kb upstream 2.0kb upstream 2000 false chr1: 45010114-45012113 Medicago truncatula
Medtr1g099640 2.0kb downstream 2.0kb downstream 3402 true chr1: 45006712-45010113 Medicago truncatula
Medtr1g099640 2.0kb downstream 2.0kb downstream 2000 false chr1: 45006712-45008711 Medicago truncatula
Medtr1g099640 5.0kb upstream 5.0kb upstream 6402 true chr1: 45008712-45015113 Medicago truncatula
Medtr1g099640 5.0kb upstream 5.0kb upstream 5000 false chr1: 45010114-45015113 Medicago truncatula
Medtr1g099640 5.0kb downstream 5.0kb downstream 6402 true chr1: 45003712-45010113 Medicago truncatula
Medtr1g099640 5.0kb downstream 5.0kb downstream 5000 false chr1: 45003712-45008711 Medicago truncatula
Medtr1g099640 10.0kb upstream 10.0kb upstream 11402 true chr1: 45008712-45020113 Medicago truncatula
Medtr1g099640 10.0kb upstream 10.0kb upstream 10000 false chr1: 45010114-45020113 Medicago truncatula
Medtr1g099640 10.0kb downstream 10.0kb downstream 11402 true chr1: 44998712-45010113 Medicago truncatula
Medtr1g099640 10.0kb downstream 10.0kb downstream 10000 false chr1: 44998712-45008711 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298097 5265 Fabidae View MSA
124072200 5270 Rosid View MSA
123751300 5271 Pentapetalae View MSA
122793053 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.503        
cufflinks 0.012     Low Low
cufflinks 0.045     Low  
cufflinks 12.64     High High
cufflinks 0.02     Low  
cufflinks 6.097        
cufflinks 15.913     High High
cufflinks 0.013     Low Low
cufflinks 9.492        

0 Strain