Gene : Medtr1g100587 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22814//PTHR22814:SF52 - COPPER TRANSPORT PROTEIN ATOX1-RELATED Description:  heavy metal-associated domain protein, putative
Genomic Order:  5651 Name:  ? Medtr1g100587
Secondary Identifier:  ? PAC:31098841
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g100587 0.5kb upstream 0.5kb upstream 1593 true chr1: 45518715-45520307 Medicago truncatula
Medtr1g100587 0.5kb upstream 0.5kb upstream 500 false chr1: 45518715-45519214 Medicago truncatula
Medtr1g100587 0.5kb downstream 0.5kb downstream 1593 true chr1: 45519215-45520807 Medicago truncatula
Medtr1g100587 0.5kb downstream 0.5kb downstream 500 false chr1: 45520308-45520807 Medicago truncatula
Medtr1g100587 1.0kb upstream 1.0kb upstream 2093 true chr1: 45518215-45520307 Medicago truncatula
Medtr1g100587 1.0kb upstream 1.0kb upstream 1000 false chr1: 45518215-45519214 Medicago truncatula
Medtr1g100587 1.0kb downstream 1.0kb downstream 2093 true chr1: 45519215-45521307 Medicago truncatula
Medtr1g100587 1.0kb downstream 1.0kb downstream 1000 false chr1: 45520308-45521307 Medicago truncatula
Medtr1g100587 2.0kb upstream 2.0kb upstream 3093 true chr1: 45517215-45520307 Medicago truncatula
Medtr1g100587 2.0kb upstream 2.0kb upstream 2000 false chr1: 45517215-45519214 Medicago truncatula
Medtr1g100587 2.0kb downstream 2.0kb downstream 3093 true chr1: 45519215-45522307 Medicago truncatula
Medtr1g100587 2.0kb downstream 2.0kb downstream 2000 false chr1: 45520308-45522307 Medicago truncatula
Medtr1g100587 5.0kb upstream 5.0kb upstream 6093 true chr1: 45514215-45520307 Medicago truncatula
Medtr1g100587 5.0kb upstream 5.0kb upstream 5000 false chr1: 45514215-45519214 Medicago truncatula
Medtr1g100587 5.0kb downstream 5.0kb downstream 6093 true chr1: 45519215-45525307 Medicago truncatula
Medtr1g100587 5.0kb downstream 5.0kb downstream 5000 false chr1: 45520308-45525307 Medicago truncatula
Medtr1g100587 10.0kb upstream 10.0kb upstream 11093 true chr1: 45509215-45520307 Medicago truncatula
Medtr1g100587 10.0kb upstream 10.0kb upstream 10000 false chr1: 45509215-45519214 Medicago truncatula
Medtr1g100587 10.0kb downstream 10.0kb downstream 11093 true chr1: 45519215-45530307 Medicago truncatula
Medtr1g100587 10.0kb downstream 10.0kb downstream 10000 false chr1: 45520308-45530307 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122256978 5265 Fabidae Singleton cluster - no MSA
124061014 5270 Rosid View MSA
123749167 5271 Pentapetalae View MSA
122790653 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.221        
cufflinks 20.857     High  
cufflinks 28.717     High High
cufflinks 0.743        
cufflinks 13.502     High  
cufflinks 1.609        
cufflinks 0.677        
cufflinks 16.811     High  
cufflinks 0.061     Low Low

0 Strain