Gene : Medtr1g100150 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11972:SF62 - FERRIC REDUCTION OXIDASE 4-RELATED Description:  oxidoreductase/ferric-chelate reductase
Genomic Order:  5600 Name:  ? Medtr1g100150
Secondary Identifier:  ? PAC:31093414
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5934 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g100150 0.5kb upstream 0.5kb upstream 6355 true chr1: 45125089-45131443 Medicago truncatula
Medtr1g100150 0.5kb upstream 0.5kb upstream 500 false chr1: 45125089-45125588 Medicago truncatula
Medtr1g100150 0.5kb downstream 0.5kb downstream 6355 true chr1: 45125589-45131943 Medicago truncatula
Medtr1g100150 0.5kb downstream 0.5kb downstream 500 false chr1: 45131444-45131943 Medicago truncatula
Medtr1g100150 1.0kb upstream 1.0kb upstream 6855 true chr1: 45124589-45131443 Medicago truncatula
Medtr1g100150 1.0kb upstream 1.0kb upstream 1000 false chr1: 45124589-45125588 Medicago truncatula
Medtr1g100150 1.0kb downstream 1.0kb downstream 6855 true chr1: 45125589-45132443 Medicago truncatula
Medtr1g100150 1.0kb downstream 1.0kb downstream 1000 false chr1: 45131444-45132443 Medicago truncatula
Medtr1g100150 2.0kb upstream 2.0kb upstream 7855 true chr1: 45123589-45131443 Medicago truncatula
Medtr1g100150 2.0kb upstream 2.0kb upstream 2000 false chr1: 45123589-45125588 Medicago truncatula
Medtr1g100150 2.0kb downstream 2.0kb downstream 7855 true chr1: 45125589-45133443 Medicago truncatula
Medtr1g100150 2.0kb downstream 2.0kb downstream 2000 false chr1: 45131444-45133443 Medicago truncatula
Medtr1g100150 5.0kb upstream 5.0kb upstream 10855 true chr1: 45120589-45131443 Medicago truncatula
Medtr1g100150 5.0kb upstream 5.0kb upstream 5000 false chr1: 45120589-45125588 Medicago truncatula
Medtr1g100150 5.0kb downstream 5.0kb downstream 10855 true chr1: 45125589-45136443 Medicago truncatula
Medtr1g100150 5.0kb downstream 5.0kb downstream 5000 false chr1: 45131444-45136443 Medicago truncatula
Medtr1g100150 10.0kb upstream 10.0kb upstream 15855 true chr1: 45115589-45131443 Medicago truncatula
Medtr1g100150 10.0kb upstream 10.0kb upstream 10000 false chr1: 45115589-45125588 Medicago truncatula
Medtr1g100150 10.0kb downstream 10.0kb downstream 15855 true chr1: 45125589-45141443 Medicago truncatula
Medtr1g100150 10.0kb downstream 10.0kb downstream 10000 false chr1: 45131444-45141443 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312218 5265 Fabidae View MSA
124071281 5270 Rosid View MSA
123746738 5271 Pentapetalae View MSA
122787767 5272 Eudicot View MSA
122051677 5273 Angiosperm View MSA
121345980 5274 Embryophyte View MSA
123428579 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.003     Low  
cufflinks 0.11        
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.002     Low Low
cufflinks 0.49       High

0 Strain