Gene : Medtr1g100220 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33162:SF3 - SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC Description:  sec-independent protein translocase
Genomic Order:  5605 Name:  ? Medtr1g100220
Secondary Identifier:  ? PAC:31098834
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g100220 0.5kb upstream 0.5kb upstream 6056 true chr1: 45165728-45171783 Medicago truncatula
Medtr1g100220 0.5kb upstream 0.5kb upstream 500 false chr1: 45171284-45171783 Medicago truncatula
Medtr1g100220 0.5kb downstream 0.5kb downstream 6056 true chr1: 45165228-45171283 Medicago truncatula
Medtr1g100220 0.5kb downstream 0.5kb downstream 500 false chr1: 45165228-45165727 Medicago truncatula
Medtr1g100220 1.0kb upstream 1.0kb upstream 6556 true chr1: 45165728-45172283 Medicago truncatula
Medtr1g100220 1.0kb upstream 1.0kb upstream 1000 false chr1: 45171284-45172283 Medicago truncatula
Medtr1g100220 1.0kb downstream 1.0kb downstream 6556 true chr1: 45164728-45171283 Medicago truncatula
Medtr1g100220 1.0kb downstream 1.0kb downstream 1000 false chr1: 45164728-45165727 Medicago truncatula
Medtr1g100220 2.0kb upstream 2.0kb upstream 7556 true chr1: 45165728-45173283 Medicago truncatula
Medtr1g100220 2.0kb upstream 2.0kb upstream 2000 false chr1: 45171284-45173283 Medicago truncatula
Medtr1g100220 2.0kb downstream 2.0kb downstream 7556 true chr1: 45163728-45171283 Medicago truncatula
Medtr1g100220 2.0kb downstream 2.0kb downstream 2000 false chr1: 45163728-45165727 Medicago truncatula
Medtr1g100220 5.0kb upstream 5.0kb upstream 10556 true chr1: 45165728-45176283 Medicago truncatula
Medtr1g100220 5.0kb upstream 5.0kb upstream 5000 false chr1: 45171284-45176283 Medicago truncatula
Medtr1g100220 5.0kb downstream 5.0kb downstream 10556 true chr1: 45160728-45171283 Medicago truncatula
Medtr1g100220 5.0kb downstream 5.0kb downstream 5000 false chr1: 45160728-45165727 Medicago truncatula
Medtr1g100220 10.0kb upstream 10.0kb upstream 15556 true chr1: 45165728-45181283 Medicago truncatula
Medtr1g100220 10.0kb upstream 10.0kb upstream 10000 false chr1: 45171284-45181283 Medicago truncatula
Medtr1g100220 10.0kb downstream 10.0kb downstream 15556 true chr1: 45155728-45171283 Medicago truncatula
Medtr1g100220 10.0kb downstream 10.0kb downstream 10000 false chr1: 45155728-45165727 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041291 5273 Angiosperm View MSA
122310502 5265 Fabidae View MSA
124064942 5270 Rosid View MSA
123739893 5271 Pentapetalae View MSA
122786242 5272 Eudicot View MSA
121347697 5274 Embryophyte View MSA
123425251 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.462       Low
cufflinks 5.137        
cufflinks 7.493       High
cufflinks 1.137        
cufflinks 8.559       High
cufflinks 0.72        
cufflinks 0.455       Low
cufflinks 6.476        
cufflinks 0.603        

0 Strain