Gene : Medtr1g088910 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10168:SF118 - GLUTAREDOXIN-C11-RELATED Description:  glutaredoxin-C1 protein
Genomic Order:  4917 Name:  ? Medtr1g088910
Secondary Identifier:  ? PAC:31098556
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula THIOREDOX-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g088910 0.5kb upstream 0.5kb upstream 1338 true chr1: 39845959-39847296 Medicago truncatula
Medtr1g088910 0.5kb upstream 0.5kb upstream 500 false chr1: 39845959-39846458 Medicago truncatula
Medtr1g088910 0.5kb downstream 0.5kb downstream 1338 true chr1: 39846459-39847796 Medicago truncatula
Medtr1g088910 0.5kb downstream 0.5kb downstream 500 false chr1: 39847297-39847796 Medicago truncatula
Medtr1g088910 1.0kb upstream 1.0kb upstream 1838 true chr1: 39845459-39847296 Medicago truncatula
Medtr1g088910 1.0kb upstream 1.0kb upstream 1000 false chr1: 39845459-39846458 Medicago truncatula
Medtr1g088910 1.0kb downstream 1.0kb downstream 1838 true chr1: 39846459-39848296 Medicago truncatula
Medtr1g088910 1.0kb downstream 1.0kb downstream 1000 false chr1: 39847297-39848296 Medicago truncatula
Medtr1g088910 2.0kb upstream 2.0kb upstream 2838 true chr1: 39844459-39847296 Medicago truncatula
Medtr1g088910 2.0kb upstream 2.0kb upstream 2000 false chr1: 39844459-39846458 Medicago truncatula
Medtr1g088910 2.0kb downstream 2.0kb downstream 2838 true chr1: 39846459-39849296 Medicago truncatula
Medtr1g088910 2.0kb downstream 2.0kb downstream 2000 false chr1: 39847297-39849296 Medicago truncatula
Medtr1g088910 5.0kb upstream 5.0kb upstream 5838 true chr1: 39841459-39847296 Medicago truncatula
Medtr1g088910 5.0kb upstream 5.0kb upstream 5000 false chr1: 39841459-39846458 Medicago truncatula
Medtr1g088910 5.0kb downstream 5.0kb downstream 5838 true chr1: 39846459-39852296 Medicago truncatula
Medtr1g088910 5.0kb downstream 5.0kb downstream 5000 false chr1: 39847297-39852296 Medicago truncatula
Medtr1g088910 10.0kb upstream 10.0kb upstream 10838 true chr1: 39836459-39847296 Medicago truncatula
Medtr1g088910 10.0kb upstream 10.0kb upstream 10000 false chr1: 39836459-39846458 Medicago truncatula
Medtr1g088910 10.0kb downstream 10.0kb downstream 10838 true chr1: 39846459-39857296 Medicago truncatula
Medtr1g088910 10.0kb downstream 10.0kb downstream 10000 false chr1: 39847297-39857296 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315072 5265 Fabidae View MSA
124063697 5270 Rosid View MSA
123752852 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.306       Low
cufflinks 21.285     High  
cufflinks 41.294     High  
cufflinks 187.352     High High
cufflinks 21.936     High  
cufflinks 344.915     High High
cufflinks 62.995     High  
cufflinks 26.549     High  
cufflinks 25.008     High  

0 Strain