Gene : Medtr1g088700 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR22932//PTHR22932:SF5 - TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE Description:  CS domain protein
Genomic Order:  4893 Name:  ? Medtr1g088700
Secondary Identifier:  ? PAC:31099085
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g088700 0.5kb upstream 0.5kb upstream 3653 true chr1: 39676406-39680058 Medicago truncatula
Medtr1g088700 0.5kb upstream 0.5kb upstream 500 false chr1: 39676406-39676905 Medicago truncatula
Medtr1g088700 0.5kb downstream 0.5kb downstream 3653 true chr1: 39676906-39680558 Medicago truncatula
Medtr1g088700 0.5kb downstream 0.5kb downstream 500 false chr1: 39680059-39680558 Medicago truncatula
Medtr1g088700 1.0kb upstream 1.0kb upstream 4153 true chr1: 39675906-39680058 Medicago truncatula
Medtr1g088700 1.0kb upstream 1.0kb upstream 1000 false chr1: 39675906-39676905 Medicago truncatula
Medtr1g088700 1.0kb downstream 1.0kb downstream 4153 true chr1: 39676906-39681058 Medicago truncatula
Medtr1g088700 1.0kb downstream 1.0kb downstream 1000 false chr1: 39680059-39681058 Medicago truncatula
Medtr1g088700 2.0kb upstream 2.0kb upstream 5153 true chr1: 39674906-39680058 Medicago truncatula
Medtr1g088700 2.0kb upstream 2.0kb upstream 2000 false chr1: 39674906-39676905 Medicago truncatula
Medtr1g088700 2.0kb downstream 2.0kb downstream 5153 true chr1: 39676906-39682058 Medicago truncatula
Medtr1g088700 2.0kb downstream 2.0kb downstream 2000 false chr1: 39680059-39682058 Medicago truncatula
Medtr1g088700 5.0kb upstream 5.0kb upstream 8153 true chr1: 39671906-39680058 Medicago truncatula
Medtr1g088700 5.0kb upstream 5.0kb upstream 5000 false chr1: 39671906-39676905 Medicago truncatula
Medtr1g088700 5.0kb downstream 5.0kb downstream 8153 true chr1: 39676906-39685058 Medicago truncatula
Medtr1g088700 5.0kb downstream 5.0kb downstream 5000 false chr1: 39680059-39685058 Medicago truncatula
Medtr1g088700 10.0kb upstream 10.0kb upstream 13153 true chr1: 39666906-39680058 Medicago truncatula
Medtr1g088700 10.0kb upstream 10.0kb upstream 10000 false chr1: 39666906-39676905 Medicago truncatula
Medtr1g088700 10.0kb downstream 10.0kb downstream 13153 true chr1: 39676906-39690058 Medicago truncatula
Medtr1g088700 10.0kb downstream 10.0kb downstream 10000 false chr1: 39680059-39690058 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311166 5265 Fabidae View MSA
124069234 5270 Rosid View MSA
123751526 5271 Pentapetalae View MSA
122794071 5272 Eudicot View MSA
122047385 5273 Angiosperm View MSA
121348717 5274 Embryophyte View MSA
123424111 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.133       High
cufflinks 1.32        
cufflinks 0.468       Low
cufflinks 1.719        
cufflinks 1.03        
cufflinks 1.493        
cufflinks 2.571        
cufflinks 0.633       Low
cufflinks 3.402       High

0 Strain