Gene : Medtr1g089760 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG1893 - Uncharacterized conserved protein Description:  DUF3595 family protein
Genomic Order:  4961 Name:  ? Medtr1g089760
Secondary Identifier:  ? PAC:31099742
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g089760 0.5kb upstream 0.5kb upstream 16926 true chr1: 40171015-40187940 Medicago truncatula
Medtr1g089760 0.5kb upstream 0.5kb upstream 500 false chr1: 40187441-40187940 Medicago truncatula
Medtr1g089760 0.5kb downstream 0.5kb downstream 16926 true chr1: 40170515-40187440 Medicago truncatula
Medtr1g089760 0.5kb downstream 0.5kb downstream 500 false chr1: 40170515-40171014 Medicago truncatula
Medtr1g089760 1.0kb upstream 1.0kb upstream 17426 true chr1: 40171015-40188440 Medicago truncatula
Medtr1g089760 1.0kb upstream 1.0kb upstream 1000 false chr1: 40187441-40188440 Medicago truncatula
Medtr1g089760 1.0kb downstream 1.0kb downstream 17426 true chr1: 40170015-40187440 Medicago truncatula
Medtr1g089760 1.0kb downstream 1.0kb downstream 1000 false chr1: 40170015-40171014 Medicago truncatula
Medtr1g089760 2.0kb upstream 2.0kb upstream 18426 true chr1: 40171015-40189440 Medicago truncatula
Medtr1g089760 2.0kb upstream 2.0kb upstream 2000 false chr1: 40187441-40189440 Medicago truncatula
Medtr1g089760 2.0kb downstream 2.0kb downstream 18426 true chr1: 40169015-40187440 Medicago truncatula
Medtr1g089760 2.0kb downstream 2.0kb downstream 2000 false chr1: 40169015-40171014 Medicago truncatula
Medtr1g089760 5.0kb upstream 5.0kb upstream 21426 true chr1: 40171015-40192440 Medicago truncatula
Medtr1g089760 5.0kb upstream 5.0kb upstream 5000 false chr1: 40187441-40192440 Medicago truncatula
Medtr1g089760 5.0kb downstream 5.0kb downstream 21426 true chr1: 40166015-40187440 Medicago truncatula
Medtr1g089760 5.0kb downstream 5.0kb downstream 5000 false chr1: 40166015-40171014 Medicago truncatula
Medtr1g089760 10.0kb upstream 10.0kb upstream 26426 true chr1: 40171015-40197440 Medicago truncatula
Medtr1g089760 10.0kb upstream 10.0kb upstream 10000 false chr1: 40187441-40197440 Medicago truncatula
Medtr1g089760 10.0kb downstream 10.0kb downstream 26426 true chr1: 40161015-40187440 Medicago truncatula
Medtr1g089760 10.0kb downstream 10.0kb downstream 10000 false chr1: 40161015-40171014 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041327 5273 Angiosperm View MSA
122306795 5265 Fabidae View MSA
124072084 5270 Rosid View MSA
123743818 5271 Pentapetalae View MSA
122790610 5272 Eudicot View MSA
121350793 5274 Embryophyte View MSA
123427500 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.416        
cufflinks 3.521        
cufflinks 4.48       High
cufflinks 0.624       Low
cufflinks 3.739        
cufflinks 0.691       Low
cufflinks 1.874        
cufflinks 3.403        
cufflinks 0.968        

0 Strain