Gene : Medtr1g089500 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR23177:SF24 - RHO GTPASE-ACTIVATING PROTEIN 3-RELATED Description:  Rac GTPase activating protein
Genomic Order:  4933 Name:  ? Medtr1g089500
Secondary Identifier:  ? PAC:31093903
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g089500 0.5kb upstream 0.5kb upstream 3788 true chr1: 39989777-39993564 Medicago truncatula
Medtr1g089500 0.5kb upstream 0.5kb upstream 500 false chr1: 39993065-39993564 Medicago truncatula
Medtr1g089500 0.5kb downstream 0.5kb downstream 3788 true chr1: 39989277-39993064 Medicago truncatula
Medtr1g089500 0.5kb downstream 0.5kb downstream 500 false chr1: 39989277-39989776 Medicago truncatula
Medtr1g089500 1.0kb upstream 1.0kb upstream 4288 true chr1: 39989777-39994064 Medicago truncatula
Medtr1g089500 1.0kb upstream 1.0kb upstream 1000 false chr1: 39993065-39994064 Medicago truncatula
Medtr1g089500 1.0kb downstream 1.0kb downstream 4288 true chr1: 39988777-39993064 Medicago truncatula
Medtr1g089500 1.0kb downstream 1.0kb downstream 1000 false chr1: 39988777-39989776 Medicago truncatula
Medtr1g089500 2.0kb upstream 2.0kb upstream 5288 true chr1: 39989777-39995064 Medicago truncatula
Medtr1g089500 2.0kb upstream 2.0kb upstream 2000 false chr1: 39993065-39995064 Medicago truncatula
Medtr1g089500 2.0kb downstream 2.0kb downstream 5288 true chr1: 39987777-39993064 Medicago truncatula
Medtr1g089500 2.0kb downstream 2.0kb downstream 2000 false chr1: 39987777-39989776 Medicago truncatula
Medtr1g089500 5.0kb upstream 5.0kb upstream 8288 true chr1: 39989777-39998064 Medicago truncatula
Medtr1g089500 5.0kb upstream 5.0kb upstream 5000 false chr1: 39993065-39998064 Medicago truncatula
Medtr1g089500 5.0kb downstream 5.0kb downstream 8288 true chr1: 39984777-39993064 Medicago truncatula
Medtr1g089500 5.0kb downstream 5.0kb downstream 5000 false chr1: 39984777-39989776 Medicago truncatula
Medtr1g089500 10.0kb upstream 10.0kb upstream 13288 true chr1: 39989777-40003064 Medicago truncatula
Medtr1g089500 10.0kb upstream 10.0kb upstream 10000 false chr1: 39993065-40003064 Medicago truncatula
Medtr1g089500 10.0kb downstream 10.0kb downstream 13288 true chr1: 39979777-39993064 Medicago truncatula
Medtr1g089500 10.0kb downstream 10.0kb downstream 10000 false chr1: 39979777-39989776 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314458 5265 Fabidae View MSA
124063146 5270 Rosid View MSA
123747483 5271 Pentapetalae View MSA
122789353 5272 Eudicot View MSA
122046059 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.545        
cufflinks 5.196        
cufflinks 6.305        
cufflinks 22.119     High High
cufflinks 5.449        
cufflinks 10.521     High  
cufflinks 30.245     High High
cufflinks 7.837        
cufflinks 19.839     High  

0 Strain